PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY24665.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24239.6 Da PI: 9.7871 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.9 | 1.8e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++ rqvtf+kRrng+lKKA+ELSvLCda+va+i+fss+g+lyey+ TEY24665.1 9 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAQVALIVFSSRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 76.3 | 8.1e-26 | 82 | 165 | 8 | 91 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 ++e++++ +qqe++kL ++i++Lq ++Rhl Ge+L+sL++keL+qLe++Le+++++iR kK+ l ++ l+ k e+++ + TEY24665.1 82 TTQESNTQFYQQESRKLSQQIQMLQDTNRHLRGEGLSSLNVKELKQLESRLERGISRIRGKKEAQLEQENASLRAKILENEKLQ 165 47899*********************************************************************9988877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MGRGKIEIKR IENNTSRQVT FCKRRNGLLK KAYELSVLCD AQVALIVFSS RGRLYEYAHN 60 NCITSIIERY KKATLDGSNG CTTQESNTQF YQQESRKLSQ QIQMLQDTNR HLRGEGLSSL 120 NVKELKQLES RLERGISRIR GKKEAQLEQE NASLRAKILE NEKLQQLSMM PGGQDFALQA 180 YYARNMLQLN MMECGSGYDA ASSDRKTVHL GY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.2 | 6e-84 | MIKC_MADS family protein |