PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY24586.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 285aa    MW: 30728.4 Da    PI: 7.6148
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY24586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023260282223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C+ C+k+F +   L++H +  H
  TEY24586.1 260 TCKSCPKTFGSDKALESHTKAkH 282
                 7*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVAQSKWAQT NILEPAEPTV ELSPVQSMQI HPHGIVVSSA MEFWGVEVKN GETLKVAPGE  60
NMVLHLSQAC LGETKKEKAN DSACLFVNVE GKKLVLGTLV TDKIPQQQFD LVFDRDFELS  120
HNWKSGKDVE SDESDSEKDI PLVTANNAKP EVKAKQEKPA EAVKAKGKES DAGKQKDDDS  180
DDSGESDEET PKKAEPSKKR TAESATKTPV QDKKAKVTPQ KTDGKKVGGH VATPHPAKQA  240
GKTPGNKPNQ QTPQSGGSVT CKSCPKTFGS DKALESHTKA KHSNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.22e-24C2H2 family protein