PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24377.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 459aa MW: 53588.4 Da PI: 8.9007

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.3e-17	105	191	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+ vG+++rk+ skk+ ++ it+ vCs+eg++++++++ ++ +r+r++ ++ C+ak+ k ++++++++eHnHe++ TEY24377.1 105 DFYNNYARYVGYNTRKNGSKKE--KDVITWIYVVCSQEGTKQRRSEQ-SEVKRKRSSIKCFCNAKVSWKFFMGVGYVIQSFVEEHNHEMV 191 6**************99988..7789************999.999999************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MAASLIRLHF HDCFVQGCDA SILLDETVTI QSEKGAIPNA NSVRGYDVIE AVKREIERVC 60 PGVVSCADIL TLVARHASIA VIPKCPNDLK PKSGQSFMTL DRALDFYNNY ARYVGYNTRK 120 NGSKKEKDVI TWIYVVCSQE GTKQRRSEQS EVKRKRSSIK CFCNAKVSWK FFMGVGYVIQ 180 SFVEEHNHEM VEERHKRFMK LNRNLNLVHQ KFILDCANAN IGPTLSFSLF KEVLGGLDYV 240 GYTILEVRNY RRDLRAYVEG ADAQMLLNEM RRKKELCGAF TYEFEVNSKD RLTRLFWCDP 300 TAKRNYHLYG DDSSYFTSDN FRILDGLAEE DLIPDALKTK SEEFQSLRLP LRIRKQKVIK 360 TAIPKFEDNF VKGRDHDPDR ERVERKKLKK QLQQEARGAV RELRKDNHFL FEVKERENAR 420 MQEEKTEMYG KYRAFLQEQE HAFKFMDEVF DLVQFGSML

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MAASLIRLHF HDCFVQGCDA SILLDETVTI QSEKGAIPNA NSVRGYDVIE AVKREIERVC  60
PGVVSCADIL TLVARHASIA VIPKCPNDLK PKSGQSFMTL DRALDFYNNY ARYVGYNTRK  120
NGSKKEKDVI TWIYVVCSQE GTKQRRSEQS EVKRKRSSIK CFCNAKVSWK FFMGVGYVIQ  180
SFVEEHNHEM VEERHKRFMK LNRNLNLVHQ KFILDCANAN IGPTLSFSLF KEVLGGLDYV  240
GYTILEVRNY RRDLRAYVEG ADAQMLLNEM RRKKELCGAF TYEFEVNSKD RLTRLFWCDP  300
TAKRNYHLYG DDSSYFTSDN FRILDGLAEE DLIPDALKTK SEEFQSLRLP LRIRKQKVIK  360
TAIPKFEDNF VKGRDHDPDR ERVERKKLKK QLQQEARGAV RELRKDNHFL FEVKERENAR  420
MQEEKTEMYG KYRAFLQEQE HAFKFMDEVF DLVQFGSML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-24	FAR1 family protein