PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23604.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 204aa MW: 23547.5 Da PI: 6.8028

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.5	1.5e-20	55	107	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eql Le F +++++ +e++e+LA++lgL+ rqV vWFqNrRa++k TEY23604.1 55 KRKLSEEQLSMLELSFGSEHKLETERKEKLAAELGLDPRQVAVWFQNRRARWK 107 45899***********************************************9 PP
2	HD-ZIP_I/II	115.4	3.3e-37	54	144	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls+eq+++LE sF +e+kLe+erK++la eLgl+prqvavWFqnrRAR+ktk+lE+++++L++++d+ e++rL++ev +++e l+ TEY23604.1 54 RKRKLSEEQLSMLELSFGSEHKLETERKEKLAAELGLDPRQVAVWFQNRRARWKTKKLEEEFSKLRSHHDSTLVEKCRLQTEVLRMKELLS 144 8***********************************************************************************9997776 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MSHEFSDMSE YYPVGITSQF APDQGMVAEK AKTRRRRRKG KGGDNDNDGD VMMRKRKLSE 60 EQLSMLELSF GSEHKLETER KEKLAAELGL DPRQVAVWFQ NRRARWKTKK LEEEFSKLRS 120 HHDSTLVEKC RLQTEVLRMK ELLSEAETEI GRLRERVRSS DSPAGSSGQS MEQGFVGGGE 180 FGMESLESVF CGHAFQWEDH VYYM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	57	RRRRRKGKGGDNDNDGDVMMRKRK
2	35	58	RRRRRKGKGGDNDNDGDVMMRKRK
3	36	59	RRRRRKGKGGDNDNDGDVMMRKRK
4	37	60	RRRRRKGKGGDNDNDGDVMMRKRK
5	54	83	RKRKLSEEQLSMLELSFGSEHKLETERKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	3e-43	HD-ZIP family protein