PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY23428.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 302aa    MW: 33608 Da    PI: 6.8019
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY23428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.94.2e-21106153249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                 +ien++n qvtfskRr+g++KKA+EL +LC+ae a+++fs+ +k + +
  TEY23428.1 106 KIENDTNLQVTFSKRRAGVFKKASELGTLCGAECALVVFSPGNKPHSF 153
                 79***************************************9987766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MLQRQQELAN VEAQLEREKQ RKRELEAMQV PLMQMDDVTY EQLEQLRNSL MVFKHGAEAK  60
LNVGMELGNG NNDYPMHPEG GNDHMMHPEN EQRMKGKGRQ KIEMAKIEND TNLQVTFSKR  120
RAGVFKKASE LGTLCGAECA LVVFSPGNKP HSFGHPSVEA VTNRFLQANG GGGVAPALVN  180
AAERMIMVHS EAATAQRNKE LVGLETRVEQ AKQRRRELDG MVPPLQMENL SYEQLEQLRN  240
SVLMYKHGVG AKFGGGAASS VGPEYGYTVQ YPAMGAYNYE DPSAVVPYDP ATGNYHHHHP  300
GY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.15e-32M-type_MADS family protein