PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY22685.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 265aa MW: 29934.6 Da PI: 5.219

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY22685.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.8e-21	83	143	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + +ps+++++e+A++l +++e++V++WFqNrRa+ k+ TEY22685.1 83 RQRWTPTPMQLQILERIFDQgIGTPSKQKIKEIASELsqhgQISETNVYNWFQNRRARSKR 143 89***************99************************************97 PP
2	Wus_type_Homeobox	102.9	2.2e-33	83	145	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G+ tP+k++i++i++eL+++G+i+++NV++WFQNr+aR+++kq TEY22685.1 83 RQRWTPTPMQLQILERIFDQGIGTPSKQKIKEIASELSQHGQISETNVYNWFQNRRARSKRKQ 145 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MEWEKQPPQQ AEEPGGGGMF VKVMTDEQME VLRKQIACYA TICEQLVELH KSLTSQTDLA 60 GVRLGNLYCD PLITSGAHKI TGRQRWTPTP MQLQILERIF DQGIGTPSKQ KIKEIASELS 120 QHGQISETNV YNWFQNRRAR SKRKQQAAPS NNAESEVETE VESPNDKKTK PEEFQPQNIL 180 TSRAEDLCFQ NPQTSSAIRS VDPRTSKPEP MLPPEGSSKF GGNFGQMSFY GNMLSNPRMD 240 QFIGKIEVPG NYNPYLQQDD YNMDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	145	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	7e-76	WOX family protein