PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY22626.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 477aa MW: 53932.2 Da PI: 4.7585

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY22626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.5e-13	257	301	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 e+Er+RR+++N+++ Lr l+P+ + Kl+ a+iL A+eY+k+Lq TEY22626.1 257 LEAERKRRKKLNDRLYALRALVPNiS------KLDRASILGDAIEYVKELQ 301 589*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MLVQSFIERL RPLVGSKGWD YIVLWKLSDD NRSIELKDCC CAGRDNNAHE LGFDVSSSPP 60 CRDVMYPHPR VKSCDLLDLI PSSMVLDSGV HAQTLCSNQP SWLNYSHSTD SSLSSQEAIG 120 TRVLIPLSVG LVELFVAEEV AEDKGVMDLI RVQCSIALEQ QTMSNSGTTN SFSSALFQQQ 180 MSSPDLPNDI SVDRIQLSDS MFLEGDHCIF TPSMENAFQE ASRGTKWVEE DNRSDDSDED 240 DPKYRRRSGK GPQSKNLEAE RKRRKKLNDR LYALRALVPN ISKLDRASIL GDAIEYVKEL 300 QKQADDLKLK LELEQQSDDD HDESAKKTAE EGSFPQIQKR GPKREQESLS TGYHTNKSDQ 360 QMEPQVEVYQ VDGKEFFVKV FCEHKCGGFV RLIEALYAMG LEVDNVNTTR HTCLASTIFK 420 VERKNEETVE ADDVKESLLE LTRNPWPNNG ADVESETGND MDAMNHYCHM NSRHHLH

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MLVQSFIERL RPLVGSKGWD YIVLWKLSDD NRSIELKDCC CAGRDNNAHE LGFDVSSSPP  60
CRDVMYPHPR VKSCDLLDLI PSSMVLDSGV HAQTLCSNQP SWLNYSHSTD SSLSSQEAIG  120
TRVLIPLSVG LVELFVAEEV AEDKGVMDLI RVQCSIALEQ QTMSNSGTTN SFSSALFQQQ  180
MSSPDLPNDI SVDRIQLSDS MFLEGDHCIF TPSMENAFQE ASRGTKWVEE DNRSDDSDED  240
DPKYRRRSGK GPQSKNLEAE RKRRKKLNDR LYALRALVPN ISKLDRASIL GDAIEYVKEL  300
QKQADDLKLK LELEQQSDDD HDESAKKTAE EGSFPQIQKR GPKREQESLS TGYHTNKSDQ  360
QMEPQVEVYQ VDGKEFFVKV FCEHKCGGFV RLIEALYAMG LEVDNVNTTR HTCLASTIFK  420
VERKNEETVE ADDVKESLLE LTRNPWPNNG ADVESETGND MDAMNHYCHM NSRHHLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	266	RRRSGKGPQSKNLEAERKRRKK
2	260	267	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	7e-51	bHLH family protein