PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY22464.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 263aa    MW: 29519.9 Da    PI: 4.8545
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY22464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.51.8e-18857150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                k+ie+ ++ qvtfskRr  ++KKA+E+ + Cd++va + fs++g++  ++
  TEY22464.1  8 KKIEDVTKCQVTFSKRRSSLMKKANEIAICCDVDVAFVAFSPSGRISKFC 57
                68********************************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGRKIDMKKI EDVTKCQVTF SKRRSSLMKK ANEIAICCDV DVAFVAFSPS GRISKFCNKK  60
RIEDVLHRYV DLPAESRLRE LDDVQMDSRV LQNQDHEISF SSNLMENELN SGISPLLSAK  120
VQVQGIVNSD LDTPNTSNLP ISFQNSQQAT FSNAFYNSIP NLSNMPPPRS SPSTIFTGYG  180
STQYATCNFT NKDDTIQTSS QYAACNFTDK GEEETSQSNI LNASKQEGTW GDNTCWTSKI  240
QKSSLWEWED LLLDDNFNIG ISK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-24MIKC_MADS family protein