PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21261.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 481aa MW: 53009.5 Da PI: 9.1582

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY21261.1 80 FVCEICNKGFQRDQNLQLHRRGH 102 89*******************88 PP
2	zf-C2H2	12.4	0.00048	156	178	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TEY21261.1 156 WKCDKCSKKYAVQSDWKAHHKTC 178 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MSNITGDEGS FSSGEVQQQP EKHSNPVATS TNSNGSSASQ PQQKQPQPSA KKKRNLPGTP 60 DPTAEVVALS PTTLMATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTTIEVKKRV 120 YICPEPTCVH HNPARALGDL TGIKKHYSRK HGEKKWKCDK CSKKYAVQSD WKAHHKTCGT 180 REYKRDSFIT HRAFCDALAE ENNKVNQGLL GPNLSAQLPD LMSAMPITSN TNTHTNTSMG 240 FNNPLKSLPQ DLLPIPFKPI NMPAGATYAS GNLLGSPRSM PSSSSGLQLS SNSNQTGYNY 300 HQDSKHLGQI FGSAQMSATA LLQKAAQMGA TATNSPMMQK NFVSTMAGPD HVSIRPSPTV 360 HGYESFHNEP FNSGFSPQMM QKGPPELFEG GGDMVMYGGM LMDQNIPAPG FLKDMVEGSG 420 DGRMGDMTTV DFLGVGGSRG QNLEMNQHRM QVMQNNNNNN FHHHQQQHEE SDVEKPLYNT 480 F

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MSNITGDEGS FSSGEVQQQP EKHSNPVATS TNSNGSSASQ PQQKQPQPSA KKKRNLPGTP  60
DPTAEVVALS PTTLMATNRF VCEICNKGFQ RDQNLQLHRR GHNLPWKLRQ RTTIEVKKRV  120
YICPEPTCVH HNPARALGDL TGIKKHYSRK HGEKKWKCDK CSKKYAVQSD WKAHHKTCGT  180
REYKRDSFIT HRAFCDALAE ENNKVNQGLL GPNLSAQLPD LMSAMPITSN TNTHTNTSMG  240
FNNPLKSLPQ DLLPIPFKPI NMPAGATYAS GNLLGSPRSM PSSSSGLQLS SNSNQTGYNY  300
HQDSKHLGQI FGSAQMSATA LLQKAAQMGA TATNSPMMQK NFVSTMAGPD HVSIRPSPTV  360
HGYESFHNEP FNSGFSPQMM QKGPPELFEG GGDMVMYGGM LMDQNIPAPG FLKDMVEGSG  420
DGRMGDMTTV DFLGVGGSRG QNLEMNQHRM QVMQNNNNNN FHHHQQQHEE SDVEKPLYNT  480
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	3e-84	C2H2 family protein