PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY21174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 25347.2 Da PI: 8.9161 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 56.2 | 4.4e-18 | 10 | 39 | 1 | 30 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvL 30 krien+snrqvt+skRrngi+KKA+E+SvL TEY21174.1 10 KRIENSSNRQVTYSKRRNGIMKKAKEISVL 39 79***************************9 PP | |||||||
2 | K-box | 60.4 | 7.4e-21 | 47 | 137 | 1 | 91 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqR.hllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 y+k sgk+l++ak+e+l++e++++kke++++q ++R hl+Ged+++Ls+keL+ Le++Le+ +++ +sk++e+++ + ++ + e e+q+ TEY21174.1 47 YHKLSGKRLWDAKHEHLDNEINRIKKENDSMQIQLRlHLKGEDISNLSYKELMVLEEALENRITTLKSKQMEFVRIMRKHNEMEE-ENQNLL 137 7899****************************77766***********************************9887666555444.444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MGRGNKIEIK RIENSSNRQV TYSKRRNGIM KKAKEISVLL VDMLDQYHKL SGKRLWDAKH 60 EHLDNEINRI KKENDSMQIQ LRLHLKGEDI SNLSYKELMV LEEALENRIT TLKSKQMEFV 120 RIMRKHNEME EENQNLLFKL WQMHLDPMDD NVMEAQGVYD HQVADYEAQQ QMPFAFRMQP 180 NLQGVSKGFL LTYKFTNNCT TLDLVGVNLW KTVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-49 | MIKC_MADS family protein |