PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20558.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 346aa MW: 37783.6 Da PI: 9.2163

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	115	138	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F+ ++L+ H+ + H TEY20558.1 115 FPCSQCGEIFPKIESLELHQAVrH 138 89******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAVIKAPKKE ASCNSSKQKK RQPQSKQPSS WDQIKNLVTC KQMENARIHH PCAKICTFMD 60 VSADKSPEKG ASRPEIVKRS GCGPPNSGAM QLRKLSGCYE CRAVVDLPLP RANVFPCSQC 120 GEIFPKIESL ELHQAVRHAV SELSPDDSSR NIVEIIFKSS WLKMENPICK IERILKVHNT 180 HRTIQRFEGY RDSIKLRAKR SARCAADGNE LLRFHAATIT CTLGARGSSS LCGSVPACCI 240 CAIIRHGFRC NKTIGVCTTA SSGRADDYLG GGGGGPRRAM LVCRVIAGRV KPRFENDAPA 300 DAEGSAAGSY DSLAGSNAAY PNMEELYVFS SRAILPCFVV IYKMLE

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAVIKAPKKE ASCNSSKQKK RQPQSKQPSS WDQIKNLVTC KQMENARIHH PCAKICTFMD  60
VSADKSPEKG ASRPEIVKRS GCGPPNSGAM QLRKLSGCYE CRAVVDLPLP RANVFPCSQC  120
GEIFPKIESL ELHQAVRHAV SELSPDDSSR NIVEIIFKSS WLKMENPICK IERILKVHNT  180
HRTIQRFEGY RDSIKLRAKR SARCAADGNE LLRFHAATIT CTLGARGSSS LCGSVPACCI  240
CAIIRHGFRC NKTIGVCTTA SSGRADDYLG GGGGGPRRAM LVCRVIAGRV KPRFENDAPA  300
DAEGSAAGSY DSLAGSNAAY PNMEELYVFS SRAILPCFVV IYKMLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-114	C2H2 family protein