PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20462.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 1035aa MW: 114868 Da PI: 5.1712

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.7e-17	92	138	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l TEY20462.1 92 KGQWTAEEDEVLRMAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 138 799**************************9.**********986 PP
2	Myb_DNA-binding	60.6	3.3e-19	144	190	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde + ++v+++G++ W+tIa++++ gR +kqc++rw+++l TEY20462.1 144 KGPWSKEEDEVITELVNKYGPKKWSTIANHLP-GRIGKQCRERWHNHL 190 79****************************.***********97 PP
3	Myb_DNA-binding	48.5	2e-15	196	238	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E++ l++a++ +G++ W+ + ++ gRt++++k++w+ TEY20462.1 196 KEAWTQDEELTLIRAHQIYGNK-WAELTKLLP-GRTDNSIKNHWN 238 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1035 aa Download sequence
MRMKHPLDPR VIGWNFGVSA VGLKFVVSVL LFHPGFKQLL PCCKASTYIY QPNMESDRTG 60 SNNNPSDAAK NGLQRSRPSH GRTSGPTRRS TKGQWTAEED EVLRMAVQRF KGKNWKKIAE 120 CFKDRTDVQC LHRWQKVLNP ELVKGPWSKE EDEVITELVN KYGPKKWSTI ANHLPGRIGK 180 QCRERWHNHL NPNINKEAWT QDEELTLIRA HQIYGNKWAE LTKLLPGRTD NSIKNHWNSS 240 VKKKLDMYLA SGLLSQFQDQ PLVIPPNQSE ASSSSKAQQC SEEDNSVVRG RTEAEEASEC 300 SQGSNIASMS RPISNTAVHP IGDCRITEES NSSQYSEDYR PAFQEEAFPI PEAPCELSDK 360 FLEHDFSLDW SSLAGKDWQL NPNELPDMSL LDVGQESPGM FALTSSSGQN TNHEEVSFQQ 420 ESHMPLGSFT SLVNMAVDAD TPNMIATSDC RMVYTHPSEV LNYIDTLLNH SSTLQFPENE 480 LVAPQSCYAP SDMLGASFSQ SVPFPMQVPA SDGQHMFDTD PNQYSSSHAD QEPNPPSTHD 540 DFIYTSESSH LQCEDNSVEV KETPKLVSAN DFGSTSSNDS QSCPLVENDS GALFYEPPRF 600 PSLDIPFFSC DLIKSGSDMH QEYSPLGIRQ LMISNMTPFK LWDSPSRDDS PDAILKSAAK 660 TFTGTPSILK KRHRDLVSPL SEKRGEKKLE GLRNQEAFSN MTNGFPRLEF MFDECIDKKG 720 QLVSLSPNRR NFEVSCMEKE NAASASELEP NDRNGSDCLN SMTAMIASTD LRAKNSERDS 780 TESANEPSGV LLEHDVNDLL FFSPERYILK NDRTVGISAR TLAKQSSRRL DAESKHGAIL 840 TSSDACFSFI CSPRLGSKDR TNLFITTSLQ SLSPSAKKVE SSGKGLASEN NNIFVESTPY 900 KRSMDSPSAW KSPWFINGFD PGPRVDTDIT IEDIGYFLSS PGDGGYDAIG LMKQLGEQTA 960 GAFADAQKVL GDETPETIMK GKCVTNLNPS GASSSMTERR TLDFSECGTP GKESARFSSS 1020 TSFSSPSSYL LKSCR

Sequence ? help Back to Top

Protein Sequence Length: 1035 aa Download sequence

MRMKHPLDPR VIGWNFGVSA VGLKFVVSVL LFHPGFKQLL PCCKASTYIY QPNMESDRTG  60
SNNNPSDAAK NGLQRSRPSH GRTSGPTRRS TKGQWTAEED EVLRMAVQRF KGKNWKKIAE  120
CFKDRTDVQC LHRWQKVLNP ELVKGPWSKE EDEVITELVN KYGPKKWSTI ANHLPGRIGK  180
QCRERWHNHL NPNINKEAWT QDEELTLIRA HQIYGNKWAE LTKLLPGRTD NSIKNHWNSS  240
VKKKLDMYLA SGLLSQFQDQ PLVIPPNQSE ASSSSKAQQC SEEDNSVVRG RTEAEEASEC  300
SQGSNIASMS RPISNTAVHP IGDCRITEES NSSQYSEDYR PAFQEEAFPI PEAPCELSDK  360
FLEHDFSLDW SSLAGKDWQL NPNELPDMSL LDVGQESPGM FALTSSSGQN TNHEEVSFQQ  420
ESHMPLGSFT SLVNMAVDAD TPNMIATSDC RMVYTHPSEV LNYIDTLLNH SSTLQFPENE  480
LVAPQSCYAP SDMLGASFSQ SVPFPMQVPA SDGQHMFDTD PNQYSSSHAD QEPNPPSTHD  540
DFIYTSESSH LQCEDNSVEV KETPKLVSAN DFGSTSSNDS QSCPLVENDS GALFYEPPRF  600
PSLDIPFFSC DLIKSGSDMH QEYSPLGIRQ LMISNMTPFK LWDSPSRDDS PDAILKSAAK  660
TFTGTPSILK KRHRDLVSPL SEKRGEKKLE GLRNQEAFSN MTNGFPRLEF MFDECIDKKG  720
QLVSLSPNRR NFEVSCMEKE NAASASELEP NDRNGSDCLN SMTAMIASTD LRAKNSERDS  780
TESANEPSGV LLEHDVNDLL FFSPERYILK NDRTVGISAR TLAKQSSRRL DAESKHGAIL  840
TSSDACFSFI CSPRLGSKDR TNLFITTSLQ SLSPSAKKVE SSGKGLASEN NNIFVESTPY  900
KRSMDSPSAW KSPWFINGFD PGPRVDTDIT IEDIGYFLSS PGDGGYDAIG LMKQLGEQTA  960
GAFADAQKVL GDETPETIMK GKCVTNLNPS GASSSMTERR TLDFSECGTP GKESARFSSS  1020
TSFSSPSSYL LKSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein