PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20251.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 501aa MW: 55973.4 Da PI: 6.5397

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.3e-07	261	282	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H TEY20251.1 261 FCTICGKGFKRDANLRMHMRGH 282 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MIAVLVSDIA NSKLNMDPDE RLCAETWAKS SSGHESLNTD SNNRPFTDFN RHHPKWEESS 60 FNGCVVRTSD QQFSGFEGSF ASDVDSQRQK KDLHGKQIPE AHESGNMQSW DPSAMLNNLS 120 FLEKKIHQLQ DLVQLVVGRR GQAMNQADEI LVQQQQLITA DLTSIIVQLI STAGSLLPSL 180 KNSESLASQL GQFGGIATQL AGVTDNIVHN KIEDRHDPTG VSEDHDMKSD DDAEEGENLP 240 PGSYEILQLE KEEILAPHTH FCTICGKGFK RDANLRMHMR GHGDEYKTPA ALAKPHKESS 300 SDPIFIKRYS CPCVGCKRNK DHKKFLPLKT ILCVKNHYKR THCDKNYTCS RCHTKKFSVI 360 ADLKTHEKHC GRDKWLCSCG TTFSRKDKLF GHIALFQGHT PAIPHEGARP SDQGQSKSEA 420 TNKVEQLDFN SCQGLMEVER SSDDPSNYFS PLGFDTSSMA GFQEFPRPLF EDAESSFSFF 480 LSGSGDYSPK NGRYAAPNDR E

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MIAVLVSDIA NSKLNMDPDE RLCAETWAKS SSGHESLNTD SNNRPFTDFN RHHPKWEESS  60
FNGCVVRTSD QQFSGFEGSF ASDVDSQRQK KDLHGKQIPE AHESGNMQSW DPSAMLNNLS  120
FLEKKIHQLQ DLVQLVVGRR GQAMNQADEI LVQQQQLITA DLTSIIVQLI STAGSLLPSL  180
KNSESLASQL GQFGGIATQL AGVTDNIVHN KIEDRHDPTG VSEDHDMKSD DDAEEGENLP  240
PGSYEILQLE KEEILAPHTH FCTICGKGFK RDANLRMHMR GHGDEYKTPA ALAKPHKESS  300
SDPIFIKRYS CPCVGCKRNK DHKKFLPLKT ILCVKNHYKR THCDKNYTCS RCHTKKFSVI  360
ADLKTHEKHC GRDKWLCSCG TTFSRKDKLF GHIALFQGHT PAIPHEGARP SDQGQSKSEA  420
TNKVEQLDFN SCQGLMEVER SSDDPSNYFS PLGFDTSSMA GFQEFPRPLF EDAESSFSFF  480
LSGSGDYSPK NGRYAAPNDR E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-176	C2H2 family protein