PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20197.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 393aa MW: 43222.3 Da PI: 5.1134

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.1	5.7e-15	33	78	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++ Ed l ++v+++G+++W +Ia+ ++ gR++k+c++rw + TEY20197.1 33 RGPWSAAEDVVLTELVNKFGPRNWCLIAAGIP-GRSGKSCRLRWCNQ 78 89****************************.*********985 PP
2	Myb_DNA-binding	56.5	6.3e-18	85	129	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++a+k +G++ W++Ia+ ++ gRt++ +k++w++ TEY20197.1 85 RKPFTDEEDRAILEAHKVHGNK-WASIAKLLP-GRTDNAIKNHWNST 129 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEGERVEEVT ERVETMEVGV EAGESENGRA KVRGPWSAAE DVVLTELVNK FGPRNWCLIA 60 AGIPGRSGKS CRLRWCNQLN PSLTRKPFTD EEDRAILEAH KVHGNKWASI AKLLPGRTDN 120 AIKNHWNSTL RRMHLKSRPE SVQNCITEFT IGSSEATSSG PALTLFNPSE EIDIWSMENQ 180 PKHSENEAET PTNCSLEQPP PFLSDGVSKS FRCSETVEST MMENELKQFK DVARTMKSSG 240 ARYNPSIAEA ISHSADGDHQ KGSHPFHKVG AFTACNSSIR EATFSRTVPG QGSLVLVQPE 300 YDILKFIDSK FDEPLIPMRC GHGCCEASST DSSLLGPEFM DYEESSNFST PYLTSLATDL 360 SSITSIRRGL ENAAEVRALA NDQIANMGTS LCA

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEGERVEEVT ERVETMEVGV EAGESENGRA KVRGPWSAAE DVVLTELVNK FGPRNWCLIA  60
AGIPGRSGKS CRLRWCNQLN PSLTRKPFTD EEDRAILEAH KVHGNKWASI AKLLPGRTDN  120
AIKNHWNSTL RRMHLKSRPE SVQNCITEFT IGSSEATSSG PALTLFNPSE EIDIWSMENQ  180
PKHSENEAET PTNCSLEQPP PFLSDGVSKS FRCSETVEST MMENELKQFK DVARTMKSSG  240
ARYNPSIAEA ISHSADGDHQ KGSHPFHKVG AFTACNSSIR EATFSRTVPG QGSLVLVQPE  300
YDILKFIDSK FDEPLIPMRC GHGCCEASST DSSLLGPEFM DYEESSNFST PYLTSLATDL  360
SSITSIRRGL ENAAEVRALA NDQIANMGTS LCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	5e-77	MYB family protein