PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20139.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 560aa MW: 61882.8 Da PI: 7.1563

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.6e-13	342	390	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h Er+RR++i ++f+ L +l+P+ +K++K++ L +++eY+++L+ TEY20139.1 342 RQNHVLSERKRREKISERFAILGSLVPSG-----GKVDKVSLLDHTIEYLRELE 390 99***********************98.....8**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MATANQNGVP DDLREQLALA VRSIQWSYAI FWSFSAKQSG ALGWSEGYYN GDIKTRKTVQ 60 AVELNSDPLG LQRSDQLREL FESLSLGEST PQPKRPTAAL SQKISLTLSG IFWLPGRSYA 120 ENEMIWLRNA HLADTKLFAR SLLAKASVNS ASLQTVVCFP HLGGVVELGT TELVPEDRGL 180 IQHIKSSFLE SSSDTVINLS HDLVYQVPDH SNIPENNLDE VENGADGEAS QLQSWQCKDD 240 AVSNGTNNAT SSSDCVSQTH GKPELKAQEF DGKKSSAANC VPLVKNATSR HCLASMVVVM 300 SITTDELHQL EQQKIEPSIA PECIATEATK ESALRTRRRG SRQNHVLSER KRREKISERF 360 AILGSLVPSG GKVDKVSLLD HTIEYLRELE RKVQDLEAYK EATERESTTQ SRAHDAMERT 420 SDNYGHSKLG SITKLLGNKK RASDVEKTAP ENKRARSSSS TDSITISITD KDVLIEMRCS 480 WRQCVLIQVM EALTQLNLES QSVQSSNTDG ILSLSINAKS KGVKGASAGA IKQALQKIIR 540 KIEDHALILM WFIYLLYRVV

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MATANQNGVP DDLREQLALA VRSIQWSYAI FWSFSAKQSG ALGWSEGYYN GDIKTRKTVQ  60
AVELNSDPLG LQRSDQLREL FESLSLGEST PQPKRPTAAL SQKISLTLSG IFWLPGRSYA  120
ENEMIWLRNA HLADTKLFAR SLLAKASVNS ASLQTVVCFP HLGGVVELGT TELVPEDRGL  180
IQHIKSSFLE SSSDTVINLS HDLVYQVPDH SNIPENNLDE VENGADGEAS QLQSWQCKDD  240
AVSNGTNNAT SSSDCVSQTH GKPELKAQEF DGKKSSAANC VPLVKNATSR HCLASMVVVM  300
SITTDELHQL EQQKIEPSIA PECIATEATK ESALRTRRRG SRQNHVLSER KRREKISERF  360
AILGSLVPSG GKVDKVSLLD HTIEYLRELE RKVQDLEAYK EATERESTTQ SRAHDAMERT  420
SDNYGHSKLG SITKLLGNKK RASDVEKTAP ENKRARSSSS TDSITISITD KDVLIEMRCS  480
WRQCVLIQVM EALTQLNLES QSVQSSNTDG ILSLSINAKS KGVKGASAGA IKQALQKIIR  540
KIEDHALILM WFIYLLYRVV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	353	RRRGSRQNHVLSERKRR
2	349	354	ERKRRE
3	350	355	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	5e-66	bHLH family protein