PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27354.4 Da PI: 9.9121 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.1 | 1.5e-30 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++ rqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ TEY19920.1 9 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 79.8 | 6.7e-27 | 65 | 144 | 14 | 93 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 ++ +qqe++kL ++i++Lq ++Rhl Ge+L+sL++keL+qLe++Le+++++iR kK+el+le++e l k+ k l+ ++ + TEY19920.1 65 SKFYQQESRKLSQQIQMLQDTNRHLRGEGLSSLNVKELKQLESRLERGISRIRGKKHELILEETECLLKRVKFLHYNQPN 144 4789******************************************************************9999877655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGRGKIEIKR IENNTSRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYANN 60 KVLVSKFYQQ ESRKLSQQIQ MLQDTNRHLR GEGLSSLNVK ELKQLESRLE RGISRIRGKK 120 HELILEETEC LLKRVKFLHY NQPNYNTKSM LFLDSFKDSI TALFLLQEAQ LEQENASLRA 180 KIQENEKLQQ LSMMPGGQDF ALQAYYARNM LQLNMMESGS GYEAASSDRK TVHLGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.4 | 7e-66 | MIKC_MADS family protein |