PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY19917.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 214aa MW: 24603.5 Da PI: 8.1759 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.7 | 8.6e-25 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ + i+s +gklye + TEY19917.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFILSAHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 51.2 | 5.4e-18 | 83 | 177 | 7 | 100 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedL.esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 k++++++ l++e++ Lk+e+e Lq+ +R + G + + ++l+eL Le++Le+ + ++Rs K++++ ++i+ l++ke lq + + L++k++e TEY19917.1 83 KEKQANEFMDLKEEINLLKNETEILQKGIRYISGGGApGAMTLNELSVLEKHLETWIYQVRSAKMDIMAQEIQLLKNKEGILQAAYNHLQEKIDE 177 44667777889*********************98775389****************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 214 aa Download sequence |
MARGKTQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGLFILSA HGKLYELATN 60 GSMKSLIDKY TKYSKEFTAE EPKEKQANEF MDLKEEINLL KNETEILQKG IRYISGGGAP 120 GAMTLNELSV LEKHLETWIY QVRSAKMDIM AQEIQLLKNK EGILQAAYNH LQEKIDEQYG 180 MIELTPMLTN IQYPLTTNIN QYPLTIPNQE IYQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71692.1 | 5e-70 | MIKC_MADS family protein |