PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19417.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 407aa MW: 46457.2 Da PI: 8.1871

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.5e-24	26	113	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y +YAk +GF +rk + +k +g+i + f+C keg+r+++++ ++ +++r+e r+gCka++kv+ ++ gk++v k+ +eHnHel+ TEY19417.1 26 AYMKYAKATGFGTRKMAAHKDPVTGNILDISFCCCKEGFRTTNNRG-VTVKNPRPEIRCGCKAMMKVNCRYGGKFRVVKFIEEHNHELC 113 59***************************************999.99*************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDEIISDDVI PNIGMKFETE VEAYDAYMKY AKATGFGTRK MAAHKDPVTG NILDISFCCC 60 KEGFRTTNNR GVTVKNPRPE IRCGCKAMMK VNCRYGGKFR VVKFIEEHNH ELCDPEKSYM 120 FRCLRQMSNI QRTQVDVAQS CGLPPKKIID VMAKEVGGIQ HLGFIHIDLK NCLRTKKTLE 180 IKQGDSGAEF SRCIYDYEEE SEFLDAWNKM IEKYDLKDNQ WLARMFSLRE KWALVYGRNT 240 FCADIITTQR SECMNDVVKH YHAAVVYTHK MFALFNEELR KAFESKIESE DELGSSRIYK 300 LAVKAVESED GYTYASDCLL KMGNNIDGMV GKANNVTVEA NKVGDVATVA TDGDANESQI 360 RGLKPKGMVT YQSSKRPKNA LEQAIRKKTE TKSNKEWFRT SFYYTGT

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDEIISDDVI PNIGMKFETE VEAYDAYMKY AKATGFGTRK MAAHKDPVTG NILDISFCCC  60
KEGFRTTNNR GVTVKNPRPE IRCGCKAMMK VNCRYGGKFR VVKFIEEHNH ELCDPEKSYM  120
FRCLRQMSNI QRTQVDVAQS CGLPPKKIID VMAKEVGGIQ HLGFIHIDLK NCLRTKKTLE  180
IKQGDSGAEF SRCIYDYEEE SEFLDAWNKM IEKYDLKDNQ WLARMFSLRE KWALVYGRNT  240
FCADIITTQR SECMNDVVKH YHAAVVYTHK MFALFNEELR KAFESKIESE DELGSSRIYK  300
LAVKAVESED GYTYASDCLL KMGNNIDGMV GKANNVTVEA NKVGDVATVA TDGDANESQI  360
RGLKPKGMVT YQSSKRPKNA LEQAIRKKTE TKSNKEWFRT SFYYTGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-31	FAR1 family protein