PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | ARF | ||||||||
Protein Properties | Length: 625aa MW: 68432.2 Da PI: 6.4595 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.2 | 1.6e-23 | 121 | 222 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF + +++ l TEY19307.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGVVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RAENGDL 215 89****************************986445444..8999*********************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY19307.1 216 CVGIRRA 222 ****997 PP | |||||||
2 | Auxin_resp | 110.8 | 1.4e-36 | 283 | 366 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Pra+++eFvv+ + v++al+v+++ GmRfkmafetedss++++ +Gt+++v+ d ++WpnS+Wr+L+ TEY19307.1 283 AASVAANGQPFEVVYYPRAGSPEFVVRESAVRAALRVQWCSGMRFKMAFETEDSSRISWfMGTISSVQVDDAIHWPNSPWRLLQ 366 68899*****************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 625 aa Download sequence |
MINVMHSLSN PMNQMENCLD PQLWHACAGG MAQIPPPNSK VYYFPQGHAE HANENVDFMK 60 FPRVSPLVLC RVASIKYLAD SESDEVFAKI RLVPLVGSES DVCEDERGFE RSEETERANS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILAKDVHGVV WKFRHIYRGT 180 PRRHLLTTGW SNFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP EVSCGWNTGI 240 PALQGGFSGF LGESVGLGGR RGGGGDLGLK ERDDVKAEAV VEAASVAANG QPFEVVYYPR 300 AGSPEFVVRE SAVRAALRVQ WCSGMRFKMA FETEDSSRIS WFMGTISSVQ VDDAIHWPNS 360 PWRLLQVVWD EPDLLHNVKR VNPWLVELVS TMAAGHGHGL SPFSPPRKKP RLPQPTEFPY 420 GQFPMGTLVT NPLSPSSPLC CLPDNIPAGV QGARHARFEP PPSDLQYTKL QPFDFKLLDY 480 AGQFPRLLSS YPASSSLMKT GSPLHEVKKI NEAKTPMFLL FGQPILTAEQ ISQSHSEGNN 540 SSDGNQENTA NVSNGSGSAV IQNFPLEASS DGEFGMERSE MSSSVLYNDA RGNAKHIGDE 600 PFGEFIKNAR RLTIVMDSGS VNLGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 258 | 265 | GGRRGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30080.1 | 0.0 | ARF family protein |