PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY18990.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family NF-YC
Protein Properties Length: 109aa    MW: 11959 Da    PI: 9.744
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY18990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC105.24.3e-3319981997
       NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97
                h+lPlarikki+k + edvkmis eaP+++skacelfi elt r+w  + + k rt++k d+aaav +tdifdflv  v 
  TEY18990.1 19 HSLPLARIKKIMKkSGEDVKMISGEAPIVFSKACELFIEELTKRAWAMTLQRKTRTMHKEDVAAAVMETDIFDFLVGLVS 98
                99**********73579**********************************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MRQPGAYSNL LSGGKTGPHS LPLARIKKIM KKSGEDVKMI SGEAPIVFSK ACELFIEELT  60
KRAWAMTLQR KTRTMHKEDV AAAVMETDIF DFLVGLVSHT PNPSAAIES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.33e-33NF-YC family protein