PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18985.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 550aa MW: 60974.1 Da PI: 8.4401

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18985.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.9e-18	60	103	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ed++l ++v+++ ++Wk+I+++m+ gRt+ qc +rwqk+l TEY18985.1 60 WTDDEDKRLTEVVQKFNAKNWKKISECMP-GRTDVQCLHRWQKVL 103 ***************************.**********986 PP
2	Myb_DNA-binding	49	1.4e-15	109	155	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT+eEd++ + v ++G++ W+ Ia+ + gR +kqc++rw+++l TEY18985.1 109 KSPWTKEEDDRVTEFVVKYGSKKWSFIANFVH-GRNGKQCRERWHNHL 155 679***************************.***********97 PP
3	Myb_DNA-binding	55	1.9e-17	161	203	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+e l +++++lG++ W+ Ia+ ++ gRt++ +k++w+ TEY18985.1 161 KDAWTKEEEETLRHYHHLLGNK-WAEIAKFLP-GRTDNAIKNHWN 203 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MIRARKVICT PESTKEVGFA SYSSFSDSSS DAVTPRSSSD SGLSVRGCSH PTKRSSQAGW 60 TDDEDKRLTE VVQKFNAKNW KKISECMPGR TDVQCLHRWQ KVLNPDLRKS PWTKEEDDRV 120 TEFVVKYGSK KWSFIANFVH GRNGKQCRER WHNHLDPAIK KDAWTKEEEE TLRHYHHLLG 180 NKWAEIAKFL PGRTDNAIKN HWNCSVKKRP DINSPPILAM ESQGRSYLNI FNNEEEKLRA 240 ESGTIPPNPD QKVTQKSDGY CSTIMAFGDT RFPADHVQAK PALLDSCRSY ENVSTNGVHF 300 GSPPTSISGS CFNGSCNKVG SYNQSTNLLN NVREDALDSL PTNANTFTST QMSRDSTCVT 360 DGSCDFSPVD TVLSLSVRGY ADNSKKTRKR SRICQSPLLA DEGSGLSCYD LSRPNGSDIK 420 TEHAGHQLVS SYPINLSLSI SSPESILKSS AISYRNAPSI IRRKTYREAA SGICSSTFST 480 SMDAADCSNL TSERGCLPCH DTGCGSSVIG QAVERRLKHA FDLEWDLSSV KCYTPGSSQL 540 KSDKKIILAP

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MIRARKVICT PESTKEVGFA SYSSFSDSSS DAVTPRSSSD SGLSVRGCSH PTKRSSQAGW  60
TDDEDKRLTE VVQKFNAKNW KKISECMPGR TDVQCLHRWQ KVLNPDLRKS PWTKEEDDRV  120
TEFVVKYGSK KWSFIANFVH GRNGKQCRER WHNHLDPAIK KDAWTKEEEE TLRHYHHLLG  180
NKWAEIAKFL PGRTDNAIKN HWNCSVKKRP DINSPPILAM ESQGRSYLNI FNNEEEKLRA  240
ESGTIPPNPD QKVTQKSDGY CSTIMAFGDT RFPADHVQAK PALLDSCRSY ENVSTNGVHF  300
GSPPTSISGS CFNGSCNKVG SYNQSTNLLN NVREDALDSL PTNANTFTST QMSRDSTCVT  360
DGSCDFSPVD TVLSLSVRGY ADNSKKTRKR SRICQSPLLA DEGSGLSCYD LSRPNGSDIK  420
TEHAGHQLVS SYPINLSLSI SSPESILKSS AISYRNAPSI IRRKTYREAA SGICSSTFST  480
SMDAADCSNL TSERGCLPCH DTGCGSSVIG QAVERRLKHA FDLEWDLSSV KCYTPGSSQL  540
KSDKKIILAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	3e-71	MYB family protein