PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18633.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 385aa MW: 41747.5 Da PI: 9.4877

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.5e-06	154	176	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 Cp Cg++F+ ++L++H+ + H TEY18633.1 154 ACPECGEVFPKLESLEHHQAVrH 176 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MALLTFLPEK SEEVIKHPPN SKSKRKKRKQ PAAKAPSSWD QFKNLLTCKQ IADSKIHDPS 60 KHHNIYSSCS SICTFRDTNT RVVHRADNSP DGSAAAQETR LLSKKSTHGS SSRSAASARS 120 APRGIQLRKL SGCYECHAIL DPARYPLPRT TICACPECGE VFPKLESLEH HQAVRHAVCE 180 LGAEDSSRNV VEIIFKSSWL KKDNPICKID RILKVQNTQR TIQRFEDYRD AVKTGATATA 240 TKRSARCAAD GNELLRFYCS TLACSLGARG SSSLCAAIQA CGVCTVIRHG FHGAKTAAGI 300 RTTASSGRAH DSLAGAGRRA MLVCRVIAGR VKRDPGEDDS DGTVGPGSYD SVAGSAGVYS 360 NMEELHVFSS RAILPCFVVI YKALE

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MALLTFLPEK SEEVIKHPPN SKSKRKKRKQ PAAKAPSSWD QFKNLLTCKQ IADSKIHDPS  60
KHHNIYSSCS SICTFRDTNT RVVHRADNSP DGSAAAQETR LLSKKSTHGS SSRSAASARS  120
APRGIQLRKL SGCYECHAIL DPARYPLPRT TICACPECGE VFPKLESLEH HQAVRHAVCE  180
LGAEDSSRNV VEIIFKSSWL KKDNPICKID RILKVQNTQR TIQRFEDYRD AVKTGATATA  240
TKRSARCAAD GNELLRFYCS TLACSLGARG SSSLCAAIQA CGVCTVIRHG FHGAKTAAGI  300
RTTASSGRAH DSLAGAGRRA MLVCRVIAGR VKRDPGEDDS DGTVGPGSYD SVAGSAGVYS  360
NMEELHVFSS RAILPCFVVI YKALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-135	C2H2 family protein