PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17960.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 569aa    MW: 62432.7 Da    PI: 7.3716
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.95.9e-1092005693374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 + L+++A a+s+g+l++a+++++r+++la+p+g++ qRl+++++ AL++r++        + +p +tse  s+e+  ++++++ev P++k+s+++aN a
  TEY17960.1 200 QSLIDAAAAISEGNLAAATEIITRIQQLANPKGTSEQRLTSFMVSALKSRVYP-------TGNPHSTSELYSKEHKLSTQMLYEVLPCFKLSFMAANLA 291
                 789*************************************************9.......5667777767799999*********************** PP

        GRAS 102 Ileavege..ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 Il+a++++  +r+H++Df+i++G+Q++ Ll+aLa+ +   + ++ l+iT++++++sg  e+l+ +gerL+ +A+++ v+f+f+v     ++dl+  +L 
  TEY17960.1 292 ILNATSEQgfQRIHVVDFEIGEGGQYMHLLHALAANQsgvKRAAALKITAFSDNTSGGDEKLKIVGERLHTLADKICVRFDFSV-KKLIVSDLNRIKLG 389
                 *****99988************************8885655688***************************************9.78899********* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 ++p+EalaVnl+++lh+l+desv++++ rde+L+lvk+lsP+v +vveqe++ n++++  r+ ea+e y al+dsl+a+++r + +r+ +E+  +gr+i
  TEY17960.1 390 IEPDEALAVNLAFKLHNLPDESVTTDNLRDELLRLVKGLSPDVTTVVEQEMNANTAPLTVRVREACELYGALLDSLDATVSRGNPDRVRIEEG-VGRKI 487
                 *********************************************************************************************.***** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vn vaceg+er+er+e ++kWr+r+++aGF++v++s+ +a++ ++ l+     + g++v e+sg +++gW++r+L+++SaWr
  TEY17960.1 488 VNSVACEGRERVERCEVFGKWRARMSMAGFESVAMSQPMADSLRARLNSGTrgNPGFTVTEQSGGICFGWMGRTLTVASAWR 569
                 ******************************************99999876556899*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    
MSSGFPGGFT GGSGGMNRSY STNQQQQFPF RSPLSEILHD PASQIRQRKR SLAEFQQQNQ  60
QGLELYLRNV KLRPNFHHAN PLSPIFPVDF PTVPNLRYGL QPLTNSYRYA ASGIFSGAEV  120
LGHETQKKKM MNHRLQELEK ELLGDEDDGD EVSVVTHSDW SETIQNLIAP TKMPISPSPT  180
SSSSSCSSTS ASPPILTTNQ SLIDAAAAIS EGNLAAATEI ITRIQQLANP KGTSEQRLTS  240
FMVSALKSRV YPTGNPHSTS ELYSKEHKLS TQMLYEVLPC FKLSFMAANL AILNATSEQG  300
FQRIHVVDFE IGEGGQYMHL LHALAANQSG VKRAAALKIT AFSDNTSGGD EKLKIVGERL  360
HTLADKICVR FDFSVKKLIV SDLNRIKLGI EPDEALAVNL AFKLHNLPDE SVTTDNLRDE  420
LLRLVKGLSP DVTTVVEQEM NANTAPLTVR VREACELYGA LLDSLDATVS RGNPDRVRIE  480
EGVGRKIVNS VACEGRERVE RCEVFGKWRA RMSMAGFESV AMSQPMADSL RARLNSGTRG  540
NPGFTVTEQS GGICFGWMGR TLTVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-130GRAS family protein