PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY17923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 550aa MW: 61019.1 Da PI: 8.2874 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.9 | 4.9e-18 | 60 | 103 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ed++l ++v+++ ++Wk+I+++m+ gRt+ qc +rwqk+l TEY17923.1 60 WTDDEDKRLTEVVQKFNAKNWKKISECMP-GRTDVQCLHRWQKVL 103 *****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 109 | 155 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT+eEd++ + v ++G++ W+ Ia+ + gR +kqc++rw+++l TEY17923.1 109 KSPWTKEEDDRVTEFVVKYGTKKWSFIANFVH-GRNGKQCRERWHNHL 155 679*****************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 55 | 1.9e-17 | 161 | 203 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+e l +++++lG++ W+ Ia+ ++ gRt++ +k++w+ TEY17923.1 161 KDAWTKEEEETLRHYHHLLGNK-WAEIAKFLP-GRTDNAIKNHWN 203 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 550 aa Download sequence |
MIRARKVICT PESTKEVGFA SYSSFSDSSS DAVTPRSSSD SGLSVRGCSH PTKRSSQAGW 60 TDDEDKRLTE VVQKFNAKNW KKISECMPGR TDVQCLHRWQ KVLNPDLRKS PWTKEEDDRV 120 TEFVVKYGTK KWSFIANFVH GRNGKQCRER WHNHLDPAIK KDAWTKEEEE TLRHYHHLLG 180 NKWAEIAKFL PGRTDNAIKN HWNCSVKKRP DINSPPILAM ESQGSSYLNI FNNEEEKLRA 240 ESGTIPPNPD QKVTQKSDGY CSTIMAFGDT RFPADHVQAK PALLDSCRSY ENVSTNGVHF 300 GSPPTSISGS CFNGSCNKVR SYNQSTNLLN NVREDALDSL PTNANTFTST QMSRDSTCVT 360 DGSCDFSPVD TVLSLSVRGY ADNSKKTRKR SRICQSPLLA DEGSGLSCYD LSRPNGSDIK 420 TEHAGHQLVS SYPINLSLSI SSPESILKSS AISYRNAPSI IRRKTYREAA SGICSSTFST 480 SMDAADCSNL TSERGCLPCH DTGCGSSVIG QAVERRLEHA FDLEWDLSSV KCYTPGSSQL 540 KSDKKIILAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G02320.2 | 3e-71 | MYB family protein |