PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 27546.3 Da PI: 8.6387 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.4e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk n+qvtfskRr+g+lKKA+E+SvLCda+v ++ifs++gkl ey++ TEY17752.1 9 KRIENKVNQQVTFSKRRTGLLKKAHEISVLCDADVGLMIFSTKGKLSEYAT 59 79***********************************************86 PP | |||||||
2 | K-box | 86 | 7.6e-29 | 87 | 173 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ el kLk ++e Lq+++ +l G++LesLs+ke q+Le+qL+ slkk Rs+Kn+l+ e+i+ lqkk k++qe+n+ L++k++e TEY17752.1 87 PGSWNVELGKLKTRLEVLQKNHSNLSGDNLESLSMKEVQNLEHQLDVSLKKLRSRKNHLMNESISMLQKKDKAMQEQNNLLSRKMKE 173 56899*******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MVRGKVVLKR IENKVNQQVT FSKRRTGLLK KAHEISVLCD ADVGLMIFST KGKLSEYATD 60 SCMERILDRY ERSSSVDGPK APDLQSPGSW NVELGKLKTR LEVLQKNHSN LSGDNLESLS 120 MKEVQNLEHQ LDVSLKKLRS RKNHLMNESI SMLQKKDKAM QEQNNLLSRK MKEKTIESTP 180 PCEAQNHNTN ALSLDLEQPL SSLNTGEENE GHVGQSEPCS NNGDMAALPW MLHHIQMQGQ 240 NRQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 2e-73 | MIKC_MADS family protein |