PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY17610.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

M-type_MADS

Protein Properties

Length: 419aa MW: 46555.1 Da PI: 6.0598

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY17610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	27.8	3.4e-09	9	47	1	39
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevavii 39 ++ie + r t+ R++g+ KK + L +LCd+ +++ii TEY17610.1 9 ESIEKQKSRLLTLNTRKEGLKKKLHQLTTLCDVPACMII 47 689***********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MGRRRLKLES IEKQKSRLLT LNTRKEGLKK KLHQLTTLCD VPACMIIRDP STNSTSIWPE 60 DSAQVRRLID SYKADPGAVK TYRVSDFFNE RQRNAEGELA KLQKKNLETE LRTWDGRLHL 120 MDEPQLREIG AAVRSEALAV QSRIDFLKRE AMVKSNEMLD LGEFGEIVDQ DVIFSIADGV 180 AGISADAQLP VVPDYSLNLP QPLMKKSTNN VMLDLDKFGG VVGQDGGYSI ADVMDFAMRA 240 NAPLNMPQDG IFSVADVMGD NGQLPLPGYY CPPPLEMFVD HNYLNQGYCS SMDVNQNVDW 300 FGGDEYDGAL LINGLPDLAA SHTFQRQLHQ FFRLPDSGLD QSLINALLLF FLPQGHHRIG 360 GICRHAFSIH SIETWLLSNT TCPLFSKPNS KGAFQYVVGD TSLKVALPCC SGVATRAKA

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MGRRRLKLES IEKQKSRLLT LNTRKEGLKK KLHQLTTLCD VPACMIIRDP STNSTSIWPE  60
DSAQVRRLID SYKADPGAVK TYRVSDFFNE RQRNAEGELA KLQKKNLETE LRTWDGRLHL  120
MDEPQLREIG AAVRSEALAV QSRIDFLKRE AMVKSNEMLD LGEFGEIVDQ DVIFSIADGV  180
AGISADAQLP VVPDYSLNLP QPLMKKSTNN VMLDLDKFGG VVGQDGGYSI ADVMDFAMRA  240
NAPLNMPQDG IFSVADVMGD NGQLPLPGYY CPPPLEMFVD HNYLNQGYCS SMDVNQNVDW  300
FGGDEYDGAL LINGLPDLAA SHTFQRQLHQ FFRLPDSGLD QSLINALLLF FLPQGHHRIG  360
GICRHAFSIH SIETWLLSNT TCPLFSKPNS KGAFQYVVGD TSLKVALPCC SGVATRAKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G55690.1	2e-16	M-type_MADS family protein