PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | TCP | ||||||||
Protein Properties | Length: 258aa MW: 29181 Da PI: 9.7558 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 86.4 | 6.9e-27 | 57 | 127 | 3 | 73 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 g+kdrhsk+ T +g+RdRR+Rls+++a++++dLq++LG+ ++sk i+WL+ + k +i++l+ +++ + + TEY17580.1 57 GGKDRHSKVFTVKGLRDRRIRLSVPTAIQLYDLQEKLGLSQPSKVIDWLIDATKLEIDKLPPLPTMPTNYL 127 79************************************************************966666333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MPKISRDRGM VGKKEEEGEF IKIPKMAPLF TPSPSSRQWS SSALKNPRIV RVSNSFGGKD 60 RHSKVFTVKG LRDRRIRLSV PTAIQLYDLQ EKLGLSQPSK VIDWLIDATK LEIDKLPPLP 120 TMPTNYLQFH QPIAPISSMP NQAYASEFIS PYLFKEREGF GGFVAQNFFP QYSSEFATPY 180 NNPNYFQSME PPNLSLSQFG GLGFPFSKEL SSSSQASSSQ NYTPHFQPYF VENNDNLQWQ 240 NSSTPMISFS LNASFHST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.1 | 8e-43 | TCP family protein |