PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17551.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 175aa MW: 19571.2 Da PI: 7.1481 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 141.2 | 3.3e-44 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+CakdC+++pyfp ++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la++++ TEY17551.1 7 PCASCKLLRRRCAKDCIFSPYFPPDDPHKFAIVHKVFGASNVSKMLQELPFHQRGDAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQA 105 7***********************************************************************************************998 PP DUF260 100 e 100 e TEY17551.1 106 E 106 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MGGGTSPCAS CKLLRRRCAK DCIFSPYFPP DDPHKFAIVH KVFGASNVSK MLQELPFHQR 60 GDAVSSLVYE ANARMRDPVY GCVGAISFLQ NQVSQLQMQL AVAQAEILCI QMQQEQQQQQ 120 QPPPLMTHNN DHHSGEDDKS SLVNFSSLQH YLSFASTSST NNVMQDPLKR ESLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 9e-77 | LBD family protein |