PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY17350.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 200aa MW: 22855.7 Da PI: 5.44

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY17350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.8	2.1e-19	12	66	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++R +f+++q++ Le+ Fe + p + +++LA++lgL+ rq+ +WFqN+Ra+ k TEY17350.1 12 SRRKRFSDDQIKSLETTFETEARPELHLKQHLASQLGLQPRQIAIWFQNKRARSK 66 57999************************************************99 PP
2	HD-ZIP_I/II	106.9	1.5e-34	13	104	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +++r+s++q+k+LE++Fe+e + e + K++la++Lglqprq+a+WFqn+RAR k+kq+E++y++Lk++yd l+ + ++L+ke+++L +++++ TEY17350.1 13 RRKRFSDDQIKSLETTFETEARPELHLKQHLASQLGLQPRQIAIWFQNKRARSKSKQIEQEYSVLKSNYDDLALQFDALRKENQALLTQVQK 104 799************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MSINIKKTSK NSRRKRFSDD QIKSLETTFE TEARPELHLK QHLASQLGLQ PRQIAIWFQN 60 KRARSKSKQI EQEYSVLKSN YDDLALQFDA LRKENQALLT QVQKLRKMAD NKDCEEDEKN 120 QIKLGATEIP RLLLDIKGNE LCMPSCGELN GRVDYLGEEA DVLNIAQIAE SSLASPENGC 180 SFESCNFLDN TGGNAQWWDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	7e-41	HD-ZIP family protein