PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16350.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 326aa MW: 35020.4 Da PI: 5.2774

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16350.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.8	8.7e-16	22	71	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr ++ +Wv+eIr+p g + +r++lg++ tae+Aa a++ a+++l+g TEY16350.1 22 SVYRGVRCRS--RKWVSEIREP---G-KpTRIWLGTYATAEMAAVAYDVAALALKG 71 78**9776..5****8...3.68**********************998 PP
2	AP2	48.7	1.9e-15	173	221	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r ++ +g+Wv+eIr p++ ++r++lg++ t+e+Aa+a++ a+ +l+g TEY16350.1 173 IYRGIR-CR-SGKWVSEIRKPRQ---TARIWLGTYATPEMAAAAYDVAAIALKG 221 69*9.55.6*****943...4*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MECMGDEHVN NKKTTKPSGR HSVYRGVRCR SRKWVSEIRE PGKPTRIWLG TYATAEMAAV 60 AYDVAALALK GPEAVINFPA FAASCSPPAS LSAADIRTAV SNAAAAVAPS DIQLPEQEES 120 SSSCSEFIDE EALFNMPKLL VDMAEGMLIS PPRPKNDGED SSIPPPKSGR HPIYRGIRCR 180 SGKWVSEIRK PRQTARIWLG TYATPEMAAA AYDVAAIALK GSEAKINFPA LASTYPKHAS 240 DGDEDIRVAA SAAASAIAPR NAGPGEASSS VAEHEFLDEE ALFGMPKLLD DMAHGMLVSP 300 PRMKSPAEDD RSPEDYSGND TLWSYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52020.1	1e-43	ERF family protein