PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY16051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | AP2 | ||||||||
Protein Properties | Length: 204aa MW: 23558.9 Da PI: 9.4184 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.8 | 3.2e-09 | 11 | 48 | 3 | 47 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 +GV+++k +W A I++ +k+++lg g+ eeAa++++ TEY16051.1 11 MRGVYFKKL--KWQAAIKVD-----KKQIHLGIVGSQEEAARLYD 48 79****987..********4.....5******************9 PP | |||||||
2 | AP2 | 27.6 | 7.1e-09 | 94 | 132 | 3 | 48 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 +GV+++ +W A I++ +k+++lg+ g+ eeAa+ +++ TEY16051.1 94 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARVYDR 132 79***966..5********4.....5*****************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MHVENQEPCI MRGVYFKKLK WQAAIKVDKK QIHLGIVGSQ EEAARLYDSS QFLDSFLLTG 60 FILAEVLTGF ILAEVKRRKR HRRKHVENQE PCIMRGVYFK NLKWQAAIKV DKKQIHLGTV 120 GSQEEAARVY DREPNFELSE EEKQELRKLN WDEFLAITRS AITNKKSQRR SGTGPRRKLL 180 DNDCEGEEQG RSGPSASEDD MLAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 1e-38 | ERF family protein |