PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY15341.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 543aa MW: 57701.1 Da PI: 7.8577 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 33.9 | 5.4e-11 | 51 | 76 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C +++rt +C yGdrC+F+H++ TEY15341.1 51 DEPNCIYYLRTAFCGYGDRCRFNHPR 76 689*********************96 PP | |||||||
2 | zf-CCCH | 26.5 | 1.1e-08 | 156 | 176 | 7 | 27 |
SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 7 rffartGtCkyGdrCkFaHgp 27 ++++r G CkyG++Ck++H++ TEY15341.1 156 QYYMRAGMCKYGGSCKYHHPK 176 59*****************96 PP | |||||||
3 | zf-CCCH | 35.1 | 2.3e-11 | 197 | 222 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+++ +tG+Ck+G +CkF+H++ TEY15341.1 197 GEKECSYYVKTGQCKFGVTCKFHHPQ 222 7899********************97 PP | |||||||
4 | zf-CCCH | 35.4 | 1.8e-11 | 365 | 391 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C++++r+G Ck+G++Ck++H+p TEY15341.1 365 PGQPECQYYLRNGDCKFGATCKYHHPP 391 5789*********************97 PP | |||||||
5 | zf-CCCH | 36.5 | 8.1e-12 | 413 | 437 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +lC+++a++G Ck+G++CkF H++ TEY15341.1 413 APLCSHYAQNGVCKFGPSCKFDHPM 437 68*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MQRFSVIQAM EVAPADPVAE WAAPGGETGL EEPMWQLGLG GGPEAYPERP DEPNCIYYLR 60 TAFCGYGDRC RFNHPRDRGK AMGALRASGG EYPERVGQPI CQFESLTLAK VIYKYTPDAV 120 RLFPECFGRL DISATALYLL CENYVLFNSP FAMDLQYYMR AGMCKYGGSC KYHHPKQGVG 180 SSAPVALNFY GYPLRPGEKE CSYYVKTGQC KFGVTCKFHH PQLAGIPMPA PGPGSFTASA 240 AMPTPAMYPT GPSPSHQSSQ QYGVIQGNWQ VARPSMLHGS YVPGSYGPMI FPPGVVPVPG 300 WTPYSAPVSP AASPSTQQTI GAGPVYGITQ LSPSAAAYTG PYLSITSSAG PSSSIQKEQA 360 FPERPGQPEC QYYLRNGDCK FGATCKYHHP PEWSASRANY ILSPMGLPLR PGAPLCSHYA 420 QNGVCKFGPS CKFDHPMRSL SYSPSASSLT DMPVAPYPVG STIAILAPSS SSSDLRPELL 480 SGFSKNPLSS QMSSLSSSSA SVGSVFSNTE ALPQSSVQQS GQGSVSSSGG SSASPGGEAH 540 TSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18550.1 | 1e-121 | C3H family protein |