PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY14817.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 479aa MW: 53712.1 Da PI: 6.6553

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY14817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.2	7.9e-07	246	267	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H TEY14817.1 246 FCTICGKGFKRDANLRMHMRGH 267 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MDPDERLCTE TWAKSSSGLE SLDTHSNNSS LTNFDRHQKK WEESSFDRHG VRTSGQQLSG 60 SKRPFASDID GQMQMNNLQG KQIPEAPNMQ NWDPKAMLSN LSFLEKKIHQ LQDLVQLVIG 120 RRGQAMSQAD EILAQQQQLI TADLTSIIVQ LISTAGSLLP SVKNSESLSS QLGQFGGMMS 180 QAARVSDNVV HNNANKMEDH HDPTGGLEDH NMKSDDEAEE GENLPPGSYE ILQLEKEEIL 240 APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESSSDPVL IKRYSCPFVG 300 CKRNKDHKKF QPLKTILCVK NHYKRTHCDK NYTCRRCHTK KFSVIADLKT HEKHCGRDQW 360 LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL EGAGPSDQGQ NSVEAANKVE QLDFGYKLDD 420 PREDPATYFS PLGFDTSNMA SFQEFPRHLF EDAESSFSFL LSCDDSPKNG RYAAPNDLE

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MDPDERLCTE TWAKSSSGLE SLDTHSNNSS LTNFDRHQKK WEESSFDRHG VRTSGQQLSG  60
SKRPFASDID GQMQMNNLQG KQIPEAPNMQ NWDPKAMLSN LSFLEKKIHQ LQDLVQLVIG  120
RRGQAMSQAD EILAQQQQLI TADLTSIIVQ LISTAGSLLP SVKNSESLSS QLGQFGGMMS  180
QAARVSDNVV HNNANKMEDH HDPTGGLEDH NMKSDDEAEE GENLPPGSYE ILQLEKEEIL  240
APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESSSDPVL IKRYSCPFVG  300
CKRNKDHKKF QPLKTILCVK NHYKRTHCDK NYTCRRCHTK KFSVIADLKT HEKHCGRDQW  360
LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL EGAGPSDQGQ NSVEAANKVE QLDFGYKLDD  420
PREDPATYFS PLGFDTSNMA SFQEFPRHLF EDAESSFSFL LSCDDSPKNG RYAAPNDLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-179	C2H2 family protein