PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13346.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 717aa MW: 77564.5 Da PI: 7.6653

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.2	1.7e-09	420	481	10	55
HHHHHHHHHHHHHHHCTSCCC...................TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkas................kapskKlsKaeiLekAveYIksLq 55 + RRdriN+++ L+el+P++ + +Ka++L +A+eY+k Lq TEY13346.1 420 KGRRDRINEKMRALQELIPNCNkyscfteaksapqhhlASFVLVADKASMLDEAIEYLKTLQ 481 79****************888*****9999976666669**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MARGKLESSH QKPAPADMSS KPENELVELV WENGQVMMQG QPSRVTRSPT LTTSRARDST 60 TARYGKYGVE SIMNDMASVV PSGDLDLGQD DEIAPWLSYP MDDALGQGYA SEILPHLSGV 120 TTNGLSTQNS FASVDKRSSC GQTVSNLQSG ANNVKVSSSK DRPYGSWLPQ LHRQTSDALG 180 SGVTDIVSNN SKDQLDAVFR NPAQSRDTVS IQPPTNHSNF LNFSHFSRPA TLAKANLPNS 240 DGIPKSVSSV VERNENKEKG SAANCSNPVK SIHLDQAKSM PKDFESHGSG VYSAVGSSEP 300 VVKASQDSCP PERADNLCKE TPIKNDKPPI LSNNYSSAKG ALRVIGLLSL WLLLLLLALE 360 IVLIDFLASK RNIQKESSAI LRTQNAVAMM LKPNLLMRKK QLVYEDLGEA GQQKCIIFPK 420 GRRDRINEKM RALQELIPNC NKYSCFTEAK SAPQHHLASF VLVADKASML DEAIEYLKTL 480 QLQVQEFQSF EILFIADYVH GFRAMHASND VPDRNAANAS CSCSTFPTNG RRSGMGMAYG 540 MGMPLDMNVG SSSCPIYPVP PLQVPHFSST VPGLANFQRM PGQNHPVYGH PAQAYPSSVP 600 RPPFVPLAPR PPVTCATGSS TLINCETPST SQNIKSEDPA KTMTLQPICN AEARSSVHSK 660 SNQVPWKEVV DQSAGVQDNK RGTDAAAATS TDINKEPGRE ADGVGPLTTS FLCSTLT

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MARGKLESSH QKPAPADMSS KPENELVELV WENGQVMMQG QPSRVTRSPT LTTSRARDST  60
TARYGKYGVE SIMNDMASVV PSGDLDLGQD DEIAPWLSYP MDDALGQGYA SEILPHLSGV  120
TTNGLSTQNS FASVDKRSSC GQTVSNLQSG ANNVKVSSSK DRPYGSWLPQ LHRQTSDALG  180
SGVTDIVSNN SKDQLDAVFR NPAQSRDTVS IQPPTNHSNF LNFSHFSRPA TLAKANLPNS  240
DGIPKSVSSV VERNENKEKG SAANCSNPVK SIHLDQAKSM PKDFESHGSG VYSAVGSSEP  300
VVKASQDSCP PERADNLCKE TPIKNDKPPI LSNNYSSAKG ALRVIGLLSL WLLLLLLALE  360
IVLIDFLASK RNIQKESSAI LRTQNAVAMM LKPNLLMRKK QLVYEDLGEA GQQKCIIFPK  420
GRRDRINEKM RALQELIPNC NKYSCFTEAK SAPQHHLASF VLVADKASML DEAIEYLKTL  480
QLQVQEFQSF EILFIADYVH GFRAMHASND VPDRNAANAS CSCSTFPTNG RRSGMGMAYG  540
MGMPLDMNVG SSSCPIYPVP PLQVPHFSST VPGLANFQRM PGQNHPVYGH PAQAYPSSVP  600
RPPFVPLAPR PPVTCATGSS TLINCETPST SQNIKSEDPA KTMTLQPICN AEARSSVHSK  660
SNQVPWKEVV DQSAGVQDNK RGTDAAAATS TDINKEPGRE ADGVGPLTTS FLCSTLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	5e-16	bHLH family protein