PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY13328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 202aa MW: 23314.3 Da PI: 7.1493 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.6 | 1.4e-20 | 53 | 105 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++++eql Le F +++++ +e++e+LA++lgL+ rqV vWFqNrRa++k TEY13328.1 53 KRKLSEEQLSMLELSFGSEHKLETERKEKLAAELGLDPRQVAVWFQNRRARWK 105 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 115.5 | 3.3e-37 | 52 | 142 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kr+ls+eq+++LE sF +e+kLe+erK++la eLgl+prqvavWFqnrRAR+ktk+lE+++++L++++d+ e++rL++ev +++e l+ TEY13328.1 52 RKRKLSEEQLSMLELSFGSEHKLETERKEKLAAELGLDPRQVAVWFQNRRARWKTKKLEEEFSKLRSHHDSTLVEKCRLQTEVLRMKELLS 142 8***********************************************************************************9997776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MSHEFSDMSE YYPVGIITQF APDQGMVAEK AKTRRRRRKG KGGDNDGDVM MRKRKLSEEQ 60 LSMLELSFGS EHKLETERKE KLAAELGLDP RQVAVWFQNR RARWKTKKLE EEFSKLRSHH 120 DSTLVEKCRL QTEVLRMKEL LSEAETEIGR LRERVRSSDS PAGSSGQSME QGFVGGGEFG 180 MEGLESVFCG HAFQWEDHVY YM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 55 | RRRRRKGKGGDNDGDVMMRKRK |
2 | 35 | 56 | RRRRRKGKGGDNDGDVMMRKRK |
3 | 36 | 57 | RRRRRKGKGGDNDGDVMMRKRK |
4 | 37 | 58 | RRRRRKGKGGDNDGDVMMRKRK |
5 | 52 | 81 | RKRKLSEEQLSMLELSFGSEHKLETERKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-43 | HD-ZIP family protein |