PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY13293.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25815.3 Da    PI: 10.2904
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY13293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.51.9e-142654129
                S---SHHHHHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSv 29
                k+i+n + rqvtfskRr+g++KKA ELS+
  TEY13293.1 26 KKIDNLTTRQVTFSKRRKGLFKKARELSI 54
                68**************************8 PP

2K-box29.63e-111341952283
       K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 
                  kL + + +L  e+++l Ge L+ Lsl  L +Le+ +e ++++iR++K+  l+e+  +l  +
  TEY13293.1 134 GKLSRHLMELSIELKQLEGEHLQGLSLASLIKLEKLIEGGMSRIRKTKEFKLMEENARLNTQ 195
                 68999999*****************************************9999998877655 PP

Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MCDVIKYYLC LFLGCSKMVR QKIEIKKIDN LTTRQVTFSK RRKGLFKKAR ELSISAMLRL  60
PLLFSQPPAN SSTTLPQGFL SSLLLSLSLS HTHTHTHREK YDCMMQIIQR HDHQTEFKLL  120
KQPPLHIQGS DGLGKLSRHL MELSIELKQL EGEHLQGLSL ASLIKLEKLI EGGMSRIRKT  180
KEFKLMEENA RLNTQPIEKS SKRNAFDLGI PPISDSNCSD TFLKLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.21e-24MIKC_MADS family protein