PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY13293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 226aa MW: 25815.3 Da PI: 10.2904 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 44.5 | 1.9e-14 | 26 | 54 | 1 | 29 |
S---SHHHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSv 29 k+i+n + rqvtfskRr+g++KKA ELS+ TEY13293.1 26 KKIDNLTTRQVTFSKRRKGLFKKARELSI 54 68**************************8 PP | |||||||
2 | K-box | 29.6 | 3e-11 | 134 | 195 | 22 | 83 |
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 kL + + +L e+++l Ge L+ Lsl L +Le+ +e ++++iR++K+ l+e+ +l + TEY13293.1 134 GKLSRHLMELSIELKQLEGEHLQGLSLASLIKLEKLIEGGMSRIRKTKEFKLMEENARLNTQ 195 68999999*****************************************9999998877655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MCDVIKYYLC LFLGCSKMVR QKIEIKKIDN LTTRQVTFSK RRKGLFKKAR ELSISAMLRL 60 PLLFSQPPAN SSTTLPQGFL SSLLLSLSLS HTHTHTHREK YDCMMQIIQR HDHQTEFKLL 120 KQPPLHIQGS DGLGKLSRHL MELSIELKQL EGEHLQGLSL ASLIKLEKLI EGGMSRIRKT 180 KEFKLMEENA RLNTQPIEKS SKRNAFDLGI PPISDSNCSD TFLKLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.2 | 1e-24 | MIKC_MADS family protein |