PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12608.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 438aa MW: 48008.1 Da PI: 5.9665

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.1	1.2e-11	232	274	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L TEY12608.1 232 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 274 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MLPRATAAAW IDAEEDEAIS WPPRQHNDAA ASARDDAINN ASLTSFKSML DSDCFLNNAI 60 AAPNPFNLPE FSSLLFNPLD SSSSCSPSQP STSIPRPHFY PLNPAEFATR MLPFSDDSAA 120 AGGASNAINF EGFDPSGGVG LNPNRPNRPK LLRPLEVKPP VGAQPTLGDG TGRKRKRSFD 180 DEMEDIGADI STLNYDSDEP TDKFGYNSNG NSSVTAGDHK GKRKGMPAKN LMAERRRRKK 240 LNDRLYMLRS VVPKISKMDR ASILGDAIDY LKELLQRISD IHNELEATPA GSLLHPSTSF 300 NPLTPTPPTL PYRIKEEICA SSAPSPKNQP ARVEVRLREG RAVNIHMFCA RRPGLLLSTM 360 RALDNLGLDI QQAVISCFNG FALDVFRAEN MDIAKRPGLS ESRQVEYEPE LYNMEGQDVL 420 PEQIKAVLLD SAGYHGVM

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MLPRATAAAW IDAEEDEAIS WPPRQHNDAA ASARDDAINN ASLTSFKSML DSDCFLNNAI  60
AAPNPFNLPE FSSLLFNPLD SSSSCSPSQP STSIPRPHFY PLNPAEFATR MLPFSDDSAA  120
AGGASNAINF EGFDPSGGVG LNPNRPNRPK LLRPLEVKPP VGAQPTLGDG TGRKRKRSFD  180
DEMEDIGADI STLNYDSDEP TDKFGYNSNG NSSVTAGDHK GKRKGMPAKN LMAERRRRKK  240
LNDRLYMLRS VVPKISKMDR ASILGDAIDY LKELLQRISD IHNELEATPA GSLLHPSTSF  300
NPLTPTPPTL PYRIKEEICA SSAPSPKNQP ARVEVRLREG RAVNIHMFCA RRPGLLLSTM  360
RALDNLGLDI QQAVISCFNG FALDVFRAEN MDIAKRPGLS ESRQVEYEPE LYNMEGQDVL  420
PEQIKAVLLD SAGYHGVM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	240	KRKGMPAKNLMAERRRRKK
2	234	241	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-103	bHLH family protein