PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12506.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MYB_related | ||||||||
Protein Properties | Length: 88aa MW: 10404.2 Da PI: 11.1657 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.7e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEde+l v q+G ++W+++++ g+ R++k+c++rw +yl TEY12506.1 14 RGAWNKEEDERLRSFVMQFGHNNWRLVPSLAGLSRCGKSCRLRWVNYL 61 89********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MVKPPTFDSQ GMKRGAWNKE EDERLRSFVM QFGHNNWRLV PSLAGLSRCG KSCRLRWVNY 60 LKPGLKREKF TKQEVDLIRK MHNKLGNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12820.1 | 9e-35 | MYB family protein |