PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12479.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 426aa MW: 47739 Da PI: 9.024

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	55	75	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H TEY12479.1 55 CEICGKGFQRDQNLQLHKRGH 75 ******************988 PP
2	zf-C2H2	11.8	0.00077	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ TEY12479.1 129 WKCDKCSKRYAVHSDWKAHYKTC 151 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MRSTEEEAIS VASAQIDVVQ PPLKKKRNLP GNPDPEAEVI ALSPKTLMAT NRFLCEICGK 60 GFQRDQNLQL HKRGHNLPWK LKQRTGKEAR KRVYVCPEKT CVHHHASRAL GDLTGIKKHF 120 CRKHGEKKWK CDKCSKRYAV HSDWKAHYKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL 180 AEETARFTAT SHMNHNNPNL NYHLIGSSLG LGQQHFPPIF KSNSINNHSN IPKNLPIWIP 240 QTNQPNIHIP QNNNPIPKNL QEMHHRQITL DHPLIHQNPN SPPSSCHMMN WDFSPNQNPM 300 MNNKEVNAPS LFSAQHQHQN QSCAAISATA LLQRAAQIGS TTTTTDSSNI LGKFGRDEDG 360 DKLCGLYSAT NSGTSGLGSD MEVSLYPPVK RCGRAMTGDE EIGLGETRDF LGMQTICNPS 420 SINGWI

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MRSTEEEAIS VASAQIDVVQ PPLKKKRNLP GNPDPEAEVI ALSPKTLMAT NRFLCEICGK  60
GFQRDQNLQL HKRGHNLPWK LKQRTGKEAR KRVYVCPEKT CVHHHASRAL GDLTGIKKHF  120
CRKHGEKKWK CDKCSKRYAV HSDWKAHYKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL  180
AEETARFTAT SHMNHNNPNL NYHLIGSSLG LGQQHFPPIF KSNSINNHSN IPKNLPIWIP  240
QTNQPNIHIP QNNNPIPKNL QEMHHRQITL DHPLIHQNPN SPPSSCHMMN WDFSPNQNPM  300
MNNKEVNAPS LFSAQHQHQN QSCAAISATA LLQRAAQIGS TTTTTDSSNI LGKFGRDEDG  360
DKLCGLYSAT NSGTSGLGSD MEVSLYPPVK RCGRAMTGDE EIGLGETRDF LGMQTICNPS  420
SINGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-132	C2H2 family protein