PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12334.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 281aa    MW: 32229.3 Da    PI: 9.1917
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF977.7e-312574150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+
  TEY12334.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 74
                79***********************************************8 PP
2K-box90.43.3e-3014222815100
       K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk.ekelqeenkaLrkklee 100
                 +++qqe++kL+ +i+nLq+++R++lGe L+ Lsl++L++Le+++ek++ kiR+kKnell+++ie+lqk+ e el+++n++Lr+k++e
  TEY12334.1 142 QYYQQESSKLRTQINNLQNQNRQVLGEALGALSLRDLKNLETKVEKGIGKIRTKKNELLYAEIEYLQKRqEIELHHNNQCLRAKIAE 228
                 89****************************************************************9974679***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEAQSDQSRD ASPQRKNGRG KIAIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA  60
LVVFSTRGRL YEYANNSVKA TIERYKKASS DSSNNGSISE ANSQVNIQAF HTTFQFDVIE  120
VKYDNPDFHF LSKQQNVTLF FQYYQQESSK LRTQINNLQN QNRQVLGEAL GALSLRDLKN  180
LETKVEKGIG KIRTKKNELL YAEIEYLQKR QEIELHHNNQ CLRAKIAESS RAQEHMNLMP  240
GSGGFDFVGP QAYDAPNFLQ VMGLHPNEDY PKQEEPQLQL M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.14e-93MIKC_MADS family protein