PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12209.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 390aa MW: 43756.7 Da PI: 9.052

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.4e-06	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H TEY12209.1 51 YVCEICNQGFQRDQNLQMHRRRH 73 9*********************9 PP
2	zf-C2H2	17	1.7e-05	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ TEY12209.1 128 WVCHKCSKGYAVQSDYKAHLKTC 150 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MLTDIDLSSL PEPSFSFCDT TKRKRRPAGT PDPDAEVVSL SPKTLMESDR YVCEICNQGF 60 QRDQNLQMHR RRHKVPWKLL KRETPVVRKR VFVCPEPSCL HHNPCHALGD LVGIKKHFRR 120 KHSNHKQWVC HKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGR 180 IHPPPPCLSR TASSPSPSSD TNLSAAPWQA ALALPSMREV CGSSRPPNLQ LQLLANKLDE 240 DHSTQLQLSI GSSEITGDKS EAEINGVVSR FSPRESGTAG EMNEQLRVAV EEKTYAEEAR 300 QMARRQMEAA EHEFASAKRI RKTAQAELQK AQALRDHATK KINASMLEIT CHSCKSKFQQ 360 ALFAESSSSR IGLNFISSAL RDWEVKKANQ

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MLTDIDLSSL PEPSFSFCDT TKRKRRPAGT PDPDAEVVSL SPKTLMESDR YVCEICNQGF  60
QRDQNLQMHR RRHKVPWKLL KRETPVVRKR VFVCPEPSCL HHNPCHALGD LVGIKKHFRR  120
KHSNHKQWVC HKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGR  180
IHPPPPCLSR TASSPSPSSD TNLSAAPWQA ALALPSMREV CGSSRPPNLQ LQLLANKLDE  240
DHSTQLQLSI GSSEITGDKS EAEINGVVSR FSPRESGTAG EMNEQLRVAV EEKTYAEEAR  300
QMARRQMEAA EHEFASAKRI RKTAQAELQK AQALRDHATK KINASMLEIT CHSCKSKFQQ  360
ALFAESSSSR IGLNFISSAL RDWEVKKANQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	27	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-129	C2H2 family protein