PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 29685.7 Da PI: 10.057 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.3 | 6.5e-31 | 25 | 74 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+ TEY12168.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 74 79***********************************************8 PP | |||||||
2 | K-box | 90.5 | 3.1e-30 | 113 | 199 | 14 | 100 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +qqe++kL+++i+++q+++R+llGe+++++ lkeL+++e ++ek++++iR+kKne+l+++ie +qk+e el+++n++Lr+k+ e TEY12168.1 113 KKFYQQEATKLRRQIREIQNSNRQLLGEGVSNMPLKELRNMEGKVEKAISRIRTKKNEMLFAEIELMQKRELELHNANMYLRAKIGE 199 5789********************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEFPSQESES SNSLRKNGRG KIQIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LVVFSTRGRL YEYANNSVRA TIDRYKKATI DSSNTMSTSE ANTQAIRHFN GLKKFYQQEA 120 TKLRRQIREI QNSNRQLLGE GVSNMPLKEL RNMEGKVEKA ISRIRTKKNE MLFAEIELMQ 180 KRELELHNAN MYLRAKIGES ERAQQQMNMM NQEYEQPSMS SHNYDVRNFL PVNLLQPEHD 240 RHYSCQDQTP LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 1e-104 | MIKC_MADS family protein |