PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12131.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 348aa MW: 39001 Da PI: 9.6336

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F r nL+ H r H TEY12131.1 52 FVCEVCGKGFQRDQNLQLHRRGH 74 89*******************88 PP
2	zf-C2H2	12	0.00062	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C k++ +s+ k H +t+ TEY12131.1 128 WKCDKCAKRYAVQSDWKAHAKTC 150 58******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MTDNESTISS QNPLTSGSSP PPKKKRNLPG TPDPEAEVIA LSPKTLMATN RFVCEVCGKG 60 FQRDQNLQLH RRGHNLPWKL KQRSSKEARK RVYVCPEKAC VHHHPSRALG DLTGIKKHFC 120 RKHGEKKWKC DKCAKRYAVQ SDWKAHAKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA 180 QETARVTAAT HAPNLINYHF LGMPQHFPSI FKPINDQTLD PIHELTHSTQ DHHPPFANPS 240 FSNLPPPTFY NLNWDITHTS PNIPNHKEAT VSSLFSTHQN QTSSNHEAEA SARMSATALL 300 QKAAQIGATT TDPAMIYAAR IRIRVSVSEG YGYADTALSQ TTRYADTF

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MTDNESTISS QNPLTSGSSP PPKKKRNLPG TPDPEAEVIA LSPKTLMATN RFVCEVCGKG  60
FQRDQNLQLH RRGHNLPWKL KQRSSKEARK RVYVCPEKAC VHHHPSRALG DLTGIKKHFC  120
RKHGEKKWKC DKCAKRYAVQ SDWKAHAKTC GTREYKCDCG TIFSRRDSFI THRAFCDALA  180
QETARVTAAT HAPNLINYHF LGMPQHFPSI FKPINDQTLD PIHELTHSTQ DHHPPFANPS  240
FSNLPPPTFY NLNWDITHTS PNIPNHKEAT VSSLFSTHQN QTSSNHEAEA SARMSATALL  300
QKAAQIGATT TDPAMIYAAR IRIRVSVSEG YGYADTALSQ TTRYADTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-125	C2H2 family protein