PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY11853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 822aa MW: 94947.6 Da PI: 7.1807 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.3 | 5.4e-28 | 65 | 152 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ +r+ ++++t+Cka+++vkk++dgkw+++++++eHnHel p TEY11853.1 65 SFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESESG---VSRRPSVKKTDCKASMHVKKKRDGKWYIHEFVKEHNHELLP 152 5****************************************999887...77778899******************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 822 aa Download sequence |
MVDFEDNVEG GEQSIASNVV DIVDAAKSRE GQVSSSSRRD AGGIEGDTFE PHDGIEFDSH 60 EAAYSFYQEY AKSMGFTTSI KNSRRSKKTK EFIDAKFACS RYGVTPESES GVSRRPSVKK 120 TDCKASMHVK KKRDGKWYIH EFVKEHNHEL LPALAYHFRI HRNVKLAEKS NIDILYAVSE 180 RTRKMYVEMS RQAIVSQNCC LTKNEFDHQF DRGRFLALEE GDAQVVLEYF VQIQKENPCF 240 FYAIDLNEDQ RVRNLFWVDA KSRKDYATFN DVVFFDTSYT ESSEKMPIAL FLGVNHHFQP 300 MMLGCALLAD ETKPTFVWLI KTWLRAMGGQ SPKVIISDQD KQLKSAIEEV MPYSRHCFAL 360 WHILERVPET LAHVLKKHEN FMKKFNKCIF KSLTDEEFDM RWWKMVSRFE LQENEWIHSI 420 YVDRKKWVPS FMRDTFLAGM SPHQRSDSVN SYFDKYIHKK INLKEFVRQY GAIIQNQYED 480 EDMADFETWH KQPALKSPSP WEKQMSAIYT HAIFRRFQIE VLGVVGCHPK KEKEYGGNTT 540 FRVDDCEKNE NFVVTWNEAK VEVSCSCLMF EYKGFLCRHA MIVLQICGLS RIPSQYILKR 600 WTKDAKNKQM LVEGTERIRN RIQRYNDLCK RAIGLGEEGS LSEENYNIAC RALVEALKSC 660 VNINNENPAE CSSNTGGLRF TEEEDLLLPP AKTIRKNNTS KKRKTQPEPE AVAIDTQDGL 720 QRMEPLSSEG IPLNGYYGSQ QHVHGLLNLM EPPNDTFYVG QQTMQGLGQL HSLASSHDSF 780 YGAQQSMPAM GHLDFRQPTY TYGIQDEQSI RPAQLPGTAR HA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G15090.1 | 0.0 | FAR1 family protein |