PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11609.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 379aa MW: 42754.4 Da PI: 5.34

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.4	6.3e-12	58	114	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++kr + ++ +e+Aa+ ++ a++k++g TEY11609.1 58 SIYRGVTRHRWTGRYEAHLWDkTTWNSiQNKRGRQCAYDNEEDAARTYDLAALKYWG 114 57*****************66669998888888889999************98 PP
2	AP2	53.9	4.4e-17	157	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa+a++ a+ +++g TEY11609.1 157 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYSTQEEAAEAYDMAAIEYRG 208 89**99*******99644...4***********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MKRKSPSNSC SSSSSSCCIE SPSIIAQPEP KPKAKPKRVR AKRNQSDSSA TSAKSRSSIY 60 RGVTRHRWTG RYEAHLWDKT TWNSIQNKRG RQCAYDNEED AARTYDLAAL KYWGPSTILN 120 FHVEGYAKDV EEMQILTREE YLASLRRRSS GFSRGVSKYR GVARHHHNGR WEARIGRVCG 180 NKYLYLGTYS TQEEAAEAYD MAAIEYRGPN AVTNFDISNY ADKMKKFLPE VQVEELHVKQ 240 ETNSTPPDIV QADEEPHPVA ETSSPKPEPK DFNESEGMIT MDPIEEHGHP WNLCLDTLFN 300 ILPVPDMPLG EVFDYKGFDD DIECIFDEPL DEYEFLQYGC QIEAADAVVA QDLKGQDTFT 360 STSPSSSPLS TTTSACSNI

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MKRKSPSNSC SSSSSSCCIE SPSIIAQPEP KPKAKPKRVR AKRNQSDSSA TSAKSRSSIY  60
RGVTRHRWTG RYEAHLWDKT TWNSIQNKRG RQCAYDNEED AARTYDLAAL KYWGPSTILN  120
FHVEGYAKDV EEMQILTREE YLASLRRRSS GFSRGVSKYR GVARHHHNGR WEARIGRVCG  180
NKYLYLGTYS TQEEAAEAYD MAAIEYRGPN AVTNFDISNY ADKMKKFLPE VQVEELHVKQ  240
ETNSTPPDIV QADEEPHPVA ETSSPKPEPK DFNESEGMIT MDPIEEHGHP WNLCLDTLFN  300
ILPVPDMPLG EVFDYKGFDD DIECIFDEPL DEYEFLQYGC QIEAADAVVA QDLKGQDTFT  360
STSPSSSPLS TTTSACSNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-80	AP2 family protein