PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY11601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 296aa MW: 32428 Da PI: 6.6756 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 115 | 137 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C + Fs++ L H++ H TEY11601.1 115 FSCKFCRREFSTSQALGGHQNAH 137 89******************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 296 aa Download sequence |
MEALDIKLKP YDVSEPLSKE PCHSDGSVTS DESSTRARSY LTDDVEGTGH ETLTACVFLD 60 IKHEEPESPT SKEECTRYET DTSRVSLDLK LASDQDEGTS PRESNDLEQL AKKTFSCKFC 120 RREFSTSQAL GGHQNAHRQE RAAVKHRHKM VDAAVAGPTR IQYGHPYYPY LAYPNFNRSI 180 GVRAQSMIRK PYSNYSQAMA RHLAQEKMSR AYLLRPSPSM QVDGSLNLRG NPNQRLGLRD 240 GGFLSLGGNP NSAAIKDVAI DNGHQWLGLG VGGGGGGGGG GDQQEAAKEL DLELKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10970.1 | 7e-17 | C2H2 family protein |