PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY11070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 199aa MW: 22344.5 Da PI: 9.1023 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83 | 1.9e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+EL +LCdae+a+i+fs tg+ly+ys+ TEY11070.1 9 KKIDNLTSRQVTFSKRRRGLFKKAQELATLCDAEIALIVFSATGRLYDYST 59 68***********************************************96 PP | |||||||
2 | K-box | 28.6 | 5.9e-11 | 97 | 161 | 26 | 90 |
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 ke+ +L e+++l Ge+L+ L +eL +Le+ +e++l ++ +kK+ l e+ l++ ++++++ TEY11070.1 97 KELTSLTLELKQLNGEELQGLGTNELARLERVVESALGRVVKKKEIQLEEENAMLKQLAENTRNT 161 67889999**********************************************99999988775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MVRQKIQIKK IDNLTSRQVT FSKRRRGLFK KAQELATLCD AEIALIVFSA TGRLYDYSTS 60 SMMQIIQRLK MHTEGSNRFR QILHNQEGGD YNGAASKELT SLTLELKQLN GEELQGLGTN 120 ELARLERVVE SALGRVVKKK EIQLEEENAM LKQLAENTRN TVELGSSVES ITNSGGRSLD 180 NDRSVDDTAL KLGYVLHLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 9e-47 | MIKC_MADS family protein |