PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY10978.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 506aa MW: 53432.6 Da PI: 9.3154

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY10978.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00062	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F+ L H+r+H TEY10978.1 89 HECGICGQEFPLGQALGGHMRKH 111 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MSKRSRDVAG DGDDASAVAN FLMLLSAAAA AHSSGNRVLA GEDSSRIFTC KTCDRQFPSF 60 QALGGHRASH KKPRLGGGEP PSPPKPKTHE CGICGQEFPL GQALGGHMRK HRAALVDQNH 120 HEAAAAAPPP FALFPVVKKA NSRRIFSLDL NLTPLENHYF FSTESMARQA TRLIASLSSR 180 LLRPNQLNQL RNFGSPSPPP AVFVDKNTRI LCQGITGKNG TFHTEQAIEY GTKMVIALLA 240 DVMCMVGGVT PKKGGTEHLG LPVFNTVAEA KAETKANASV IYVPPPFAAK AIMEALEAEL 300 DLVVCITEGI PQHDMVRVKA ALNQQSRTRL IGPNCPGIIK PGECKIGIMP GYIHKPGRIG 360 IVSRSGTLTY EAVFQTTAVG LGQSTCVGIG GDPFNGTNFV DCMEKFLVDP QTEGIVLIGE 420 IGGTAEEDAA ALIKASGTQK PIVAFIAGLT APPGRRMGHA GAIVSGGKGT AQDKIKTLRE 480 AGVTVVESPA KIGTAMLEVF KQRGLV

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MSKRSRDVAG DGDDASAVAN FLMLLSAAAA AHSSGNRVLA GEDSSRIFTC KTCDRQFPSF  60
QALGGHRASH KKPRLGGGEP PSPPKPKTHE CGICGQEFPL GQALGGHMRK HRAALVDQNH  120
HEAAAAAPPP FALFPVVKKA NSRRIFSLDL NLTPLENHYF FSTESMARQA TRLIASLSSR  180
LLRPNQLNQL RNFGSPSPPP AVFVDKNTRI LCQGITGKNG TFHTEQAIEY GTKMVIALLA  240
DVMCMVGGVT PKKGGTEHLG LPVFNTVAEA KAETKANASV IYVPPPFAAK AIMEALEAEL  300
DLVVCITEGI PQHDMVRVKA ALNQQSRTRL IGPNCPGIIK PGECKIGIMP GYIHKPGRIG  360
IVSRSGTLTY EAVFQTTAVG LGQSTCVGIG GDPFNGTNFV DCMEKFLVDP QTEGIVLIGE  420
IGGTAEEDAA ALIKASGTQK PIVAFIAGLT APPGRRMGHA GAIVSGGKGT AQDKIKTLRE  480
AGVTVVESPA KIGTAMLEVF KQRGLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	5e-27	C2H2 family protein