PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ro07_G25680 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 389aa MW: 43575.5 Da PI: 6.8744 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 56.5 | 6.2e-18 | 155 | 205 | 2 | 53 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 + + Wt+++H++F+ea++ + G+e+AtPk+ile+m+v+gL+ e v+ LQkY Ro07_G25680 155 KNIAWTSQIHAQFLEAIRCI-GAENATPKSILEFMNVEGLSTETVAVQLQKY 205 6689****************.9****************************** PP | |||||||
2 | Response_reg | 63.4 | 1.2e-21 | 12 | 120 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l++d +p+++ + + l+ + ev +++++ l +l+ ++ +Dl+++ i +p+mdG+e++k+ ree klp ivv++ + + a +al++Ga Ro07_G25680 12 ILVIDNDPTFLACFSESLQLLKH-EVLTCRNPIRGLSTLRVRKnyYDLVMTNIHLPHMDGFEVIKRVREEF-KLPLIVVSGDDRLDVARKALQLGAA 106 89*********************.***************777777************************99.************************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +l+Kp+ ++l + Ro07_G25680 107 HYLVKPVRFNNLNN 120 *******9998876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 389 aa Download sequence |
MAATNSPFKL RILVIDNDPT FLACFSESLQ LLKHEVLTCR NPIRGLSTLR VRKNYYDLVM 60 TNIHLPHMDG FEVIKRVREE FKLPLIVVSG DDRLDVARKA LQLGAAHYLV KPVRFNNLNN 120 LLQFVNQGDK GKETSFLGEK GSASAQEANK APGKKNIAWT SQIHAQFLEA IRCIGAENAT 180 PKSILEFMNV EGLSTETVAV QLQKYLFFVR RVVVANNLSI RERTNLNNLK IAAHSLSIGQ 240 RTNSIDLNVA ANNLSIEKKS KMDLNVVANN PSIDLNLSPT NDNQTSGSTY NPQLMIDLNQ 300 MPPSDGNEYS LVGLGGCVPF YPVQQKQKYV KVEESSNSRS NITAVDFDDE HKGDFSDLEF 360 DWVDAREAFK NLCLEDELSS SWVKVLRDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 6e-37 | ARR-B family protein |