PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G25680
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family ARR-B
Protein Properties Length: 389aa    MW: 43575.5 Da    PI: 6.8744
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G25680genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.56.2e-18155205253
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                  + + Wt+++H++F+ea++ + G+e+AtPk+ile+m+v+gL+ e v+  LQkY
  Ro07_G25680 155 KNIAWTSQIHAQFLEAIRCI-GAENATPKSILEFMNVEGLSTETVAVQLQKY 205
                  6689****************.9****************************** PP

2Response_reg63.41.2e-21121201109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   +l++d +p+++  + + l+  +  ev +++++   l +l+ ++  +Dl+++ i +p+mdG+e++k+ ree  klp ivv++ +  + a +al++Ga 
   Ro07_G25680  12 ILVIDNDPTFLACFSESLQLLKH-EVLTCRNPIRGLSTLRVRKnyYDLVMTNIHLPHMDGFEVIKRVREEF-KLPLIVVSGDDRLDVARKALQLGAA 106
                   89*********************.***************777777************************99.************************* PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                    +l+Kp+  ++l +
   Ro07_G25680 107 HYLVKPVRFNNLNN 120
                   *******9998876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MAATNSPFKL RILVIDNDPT FLACFSESLQ LLKHEVLTCR NPIRGLSTLR VRKNYYDLVM  60
TNIHLPHMDG FEVIKRVREE FKLPLIVVSG DDRLDVARKA LQLGAAHYLV KPVRFNNLNN  120
LLQFVNQGDK GKETSFLGEK GSASAQEANK APGKKNIAWT SQIHAQFLEA IRCIGAENAT  180
PKSILEFMNV EGLSTETVAV QLQKYLFFVR RVVVANNLSI RERTNLNNLK IAAHSLSIGQ  240
RTNSIDLNVA ANNLSIEKKS KMDLNVVANN PSIDLNLSPT NDNQTSGSTY NPQLMIDLNQ  300
MPPSDGNEYS LVGLGGCVPF YPVQQKQKYV KVEESSNSRS NITAVDFDDE HKGDFSDLEF  360
DWVDAREAFK NLCLEDELSS SWVKVLRDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-37ARR-B family protein