PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ro07_G25400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24993.6 Da PI: 4.7571 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 9.2e-17 | 115 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k r++lg+f t +Aaka++ a+ +l+g Ro07_G25400 115 HYRGVRRRP-WGKFAAEIRDP---ArKGSRVWLGTFETDVDAAKAYDCAAFRLRG 165 7********.**********8...4445**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MAATQEQDES TLELIRQHLL GDFSFTDTFI TNLSFQLSPE ISYFQPLKSE YSLSESESTS 60 PISNPESYLN PKPEPVTMES AEEPMNSNSN SSSKSEPKRK SSSPNSSSSS GEVRHYRGVR 120 RRPWGKFAAE IRDPARKGSR VWLGTFETDV DAAKAYDCAA FRLRGRKAIL NFPLEAGESI 180 PPTNTVRKRR KSVKQEEEVV EVPEPEELDI QSWVVWEGVE DA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 2e-43 | ERF family protein |